Nocardioides aromaticivorans: CFH99_24120
Help
Entry
CFH99_24120 CDS
T07236
Name
(GenBank) PAS domain S-box protein
Organism
naro
Nocardioides aromaticivorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_9
PAS_4
PAS_8
PAS_7
PAS_3
Diguanyl_cycl_sensor
sCache_3_2
Motif
Other DBs
NCBI-ProteinID:
QSR28712
LinkDB
All DBs
Position
5073239..5075398
Genome browser
AA seq
719 aa
AA seq
DB search
MVVRDDGGGTPPGGMPSGASEQEAQRLRLILEATPSAMLMVDRTGHVVLVNAQAENLFGI
GRARLLEMEVEDLIPRRSRAAHHTYRTRYLANPAARPMGAGRDLYGLRGDGTEVPIEIGL
NPIRIGNESFVLASVIDISERLATQAALETIGRDSLRRTILASMPCSVVATDLAGRILAA
NPATEVLLGYPEAELVGAPLSRLYAGQREPGDRGLDLPAVATGEERELTYRRRDGSEVPV
GEVISPVTDDDGVLTGYLAVGFDITKRVEDRARVAYLASHDSLTGLPNRATLTRHLEDAI
REAERKQERVALLLLDVDHFKRVNDSLGHHVGDRLLLGLADRLRRTVQDRDLVARLGGDE
FVVVICGLTRIEEVSARVERLAAALPGSVSVDNREVLATASIGCAVFPDHGRTPAHMLKH
ADIAMYRAKAAGRNNLRWYDASMGADGSDKLVLSTALQQALDRDGELSVAYQPQVDLATG
ALLGFEALARWTSPALGVVPPDRFIPVAEDSGLIAHLGAQVLRQACRDAVTLREELGLPL
RMAVNVSPRQFARSTWLDEVDAALSESGLDPAALELEITEGTLMDDDNDVRLVLHELKSI
GTRIVVDDFGQGYSSLAYLTRFPLDKLKIDREFVRRIAATHADAAVIDAILAMSHALGMR
VSAEGVETLEQVEYLRARGCDEAQGFYYGEGAPLVDVANRTSRLVPSAHPSTAGAEGRT
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtggtggtgcgggacgacggcggtggcacgccgcccggtggcatgccctcgggtgcgtcc
gagcaggaggcgcagcgactgcgcctgatcctcgaggccacgccgagcgcgatgctcatg
gtggaccggacgggccatgtcgtgctggtcaacgcccaggcggagaacctgttcggcatc
ggtcgggcgcggctgctggagatggaggtcgaggacctcatcccgcggcgctcccgggcg
gcccaccacacctaccggacgcgctatctcgcgaaccctgccgctcgtcccatgggtgcc
ggacgcgacctctacgggctgcggggggacgggacggaggtcccgatcgagatcggcctc
aacccgatccggatcggcaacgagtcgttcgtgctcgcctccgtgatcgacatcagcgag
cgccttgcgacccaggcggcgctggagaccatcggccgggactcgctgcgccgcaccatc
ctcgccagcatgccctgcagcgtggtggccaccgacctggcgggccgcatcctggccgcg
aaccccgcgaccgaggtgctgctgggatatccggaggcggagctcgtgggggcgccgctg
agtcgcctctacgccggccagcgggaacccggcgaccgcgggctcgacctgcccgccgtg
gccaccggcgaggaacgggagctcacctatcgccgccgcgacggctccgaggtccccgtg
ggcgaggtcatcagcccggtcaccgacgacgacggcgtcctcaccggctacctcgccgtc
ggcttcgacatcaccaagcgggtcgaggacagggcgcgcgtcgcgtacctcgcgagccac
gactccctgaccggactgcccaaccgggccacgctgacccgccacctcgaggacgcgatc
cgggaggccgagcgcaagcaggagcgcgtcgccctgctcctcctcgacgtcgaccacttc
aaacgggtcaacgactccctcggccaccacgtcggcgaccgcctgctgctggggctggcc
gaccgcctgcggcgtacggtccaggaccgcgacctcgtcgcccggctcggcggcgacgag
ttcgtcgtggtgatctgcgggctgacccgcatcgaggaggtcagcgcccgggtcgagcgg
ctggccgccgccctcccggggtcggtgagcgtcgacaaccgcgaggtcctggcgaccgcc
agcatcggctgcgcggtcttccccgaccacggccgcaccccggcccacatgctcaagcac
gccgacatcgcgatgtaccgcgccaaggcggccgggcgcaacaacctgcgttggtacgac
gcctcgatgggcgccgacggcagcgacaagctggtcctgtccaccgcgctgcagcaggcg
ctcgaccgggacggcgagctgtcggtggcctaccagccgcaggtggacctcgcgacgggg
gcgctgctcggcttcgaggcgctcgcccgctggacctcgcccgcactgggcgtcgtaccc
cccgaccggttcatcccggtggcagaggactcgggcctcatcgcgcacctcggagcgcag
gtgctgcggcaggcgtgccgcgacgcggtgaccttgcgcgaggagctcgggctgccgctg
cggatggccgtgaacgtctcgccccggcagttcgcgcgcagcacctggctcgacgaggtg
gacgcggcgctgtcggagtccggcctcgaccccgcggccctcgagctcgagatcaccgag
ggaaccctgatggacgacgacaacgacgtccggctggtcctccatgagctcaagagcatc
ggcacgcggatcgtcgtcgacgacttcggccaaggctactcgagccttgcctacctgacc
cgcttcccgctcgacaagctcaagatcgaccgcgagttcgtccgtcgcatcgctgcgacc
cacgcggacgccgccgtcatcgacgccatcctcgccatgtcccacgcgctggggatgcgg
gtgtccgccgagggtgtcgaaaccctcgagcaggtggagtacctccgggcccgcggctgc
gacgaggcccagggcttctactacggcgagggcgctcccctcgtcgacgtcgcgaaccgg
accagccgcctggtcccgagtgctcacccatcgaccgccggagccgaaggaagaacgtga
DBGET
integrated database retrieval system
