Numenius arquata (Eurasian curlew): 141462849
Help
Entry
141462849 CDS
T11436
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141462849 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
narq03041
]
141462849 (PRPF40A)
Spliceosome [BR:
narq03041
]
Complex A
U1 snRNP components
U1 related factors
141462849 (PRPF40A)
Complex B
141462849 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
141462849
NCBI-ProteinID:
XP_074001025
LinkDB
All DBs
Position
3:1798420..1822116
Genome browser
AA seq
1026 aa
AA seq
DB search
MSGGDSAAAAATASPQPLPFSLPKPPPLMQLTPGDAVRPVASAADQSPKSTRLAGRPDWP
AGKPVSLLAPLLPPRAEPEPLMPFGPSSRQPLRGRLLGRCSGGSLLSPSMRPGGVDRGSL
MMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMM
MSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQSSVLFRPQTTHPVVCAAQQTATTNSSVS
DEHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGK
PYYYNSQTKESRWAKPKELEDLEAMIKAEENSTKPEDSTPTASAPAAAEAANAATAATTA
AETAGAATTTTAASAATAAPEAESAAGSAGESESAGTATAEEQGQATSASATQEQSGETA
ANAADDSSKQEASADGASKKEDDDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWE
QAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEK
MTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKN
ILDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEK
QKSLLRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPVFS
SGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTL
DAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRD
RFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGS
ESEDDDSHSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDIER
EKDKKERERESEKDRARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLE
QLDEDQ
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggggactcggcggcggcggcggcgaccgcctccccgcagccgctcccgttc
tccttgccgaagccccctcccctcatgcagctgacgccgggggacgccgtccgcccagtc
gcctccgccgccgaccaatcgccgaagagcacccggctggcgggccgcccggattggccg
gccgggaagccagtcagcctgctggccccgctgctcccgccccgcgcggagcccgagccg
ctcatgccctttggcccctcgtcgcggcagccactcagagggcggcttcttggcaggtgc
agcgggggcagcctcctgagcccctcgatgcggcccggcggcgtcgaccgcggctccctc
atgatgggacacccaggcatgccacattatcctcccatgggaatgcaccctatgggtcag
agaccaccaaatatgccgccagttcctcacggtatgatgcctcagatgatgccccccatg
ggaggaccgccaatggggcagatgcctggaatgatgcagtcagtaatgcctggaatgatg
atgtctcacatgtctcaagctgctatgcagcctacagtcccgccaggggtgaacagtatg
gatgcgcaagtaggtgtaacgcctcctggaactcagagctctgttttgtttcgccctcag
acaacgcatcctgtggtttgtgcagcccagcaaaccgccacaaccaacagttctgttagc
gacgagcactccaaacagaaatctacgtggacagaacacaaatcacccgatgggagaaca
tattactataatactgaaacaaagcagtctacgtgggagaagccagacgatctcaaaaca
cctgctgagcaattgttgtctaagtgcccctggaaagagtataaatctgattctggcaag
ccctactattacaattcccaaacaaaggaatcgcgctgggcaaaacccaaagagctcgag
gatctcgaagcaatgattaaagctgaagaaaacagcacaaagcccgaagactcgactccg
acggcatctgctccggctgcggcagaagcagcaaatgcagccacggcggccacgactgct
gcggaaaccgccggcgctgccactaccaccacggcagcctctgcggccacagcagccccc
gaagcagaatctgcggcaggttctgctggggaaagcgagagcgctggcacggccacagcc
gaggagcagggacaagcgacttctgcctctgccacgcaggagcagagtggagaaactgcg
gccaacgcagcagacgactcttccaagcaggaggcctcggcagatggtgcttcgaagaaa
gaggacgacgatgcccaaccagttaaaaaaacctatacgtggaatacaaaggaagaagca
aagcaagcatttaaagagctgttaaaagaaaagcgagtaccgtccaatgcttcttgggaa
caagctatgaaaatgatcattaatgatcctagatacagtgctttggcgaaattaagtgaa
aaaaagcaagcttttaatgcttacaaagttcaaacagaaaaagaagagaaagaagaagcg
agatcaaaatacaaagaggctaaagaatcattccagcgttttcttgagaaccatgaaaag
atgacatccacaacaagatacaaaaaagctgaacaaatgtttggggagatggaagtctgg
aatgcgatatctgagcgtgaccgactcgaaatttatgaagacgtcttgttttttctgtct
aagaaagagaaggaacaagccaaacagttacgaaagaggaactgggaagctttgaagaac
atactagataacatggccaatgtcacttactgtaccacgtggtcagaggctcagcagtat
ctgatggacaaccctacatttgcagaagacgaggaacttcagaacatggataaggaggat
gcactgatctgttttgaggaacacatcagggcactggaaaaagaggaggaagaagaaaaa
cagaaaagtttgcttagagaaagaaggcggcagcgtaaaaatagagaatcttttcagctc
tttttagatgaactgcacgagcacggacagttgcattccatgtcatcctggatggagctg
tacccaaccatcagctctgacatcagattcacaaatatgctgggtcagcctgttttttca
tcaggatcaacagcacttgatcttttcaagttctatgttgaagacttgaaagcacgttac
cacgatgaaaagaagatcataaaagatatcctaaaggataaaggatttgtggttgaagtg
aatacttcttttgaagatttcgttacggtcatcagctcaactaaaagagctactactcta
gatgcaggaaatatcaagctggctttcaacagtctgctagaaaaggcagaagcccgtgaa
agagagagggagaaagaagaggctcgcaaaatgaagcggaaagagtctgccttcaagagt
atgttgaagcaggctacccctccgattgaactggatgctgtctgggaggacatcagagat
aggtttgtgaaggaaccagcatttgaagacatcactctggagtctgaaagaaaaagaata
tttaaagatttcatgcatgtactagagcacgagtgtcagcatcatcattcgaagaacaag
aaacattctaaaaaatctaaaaaacaccacaggaagcgatcgcggtctcgctcgggctca
gagtctgaggatgacgacagccattcaaagaagaaaaggcagcgttcagagtcgagatca
gtttctgagcgttcttccagcgcagaatccgagaggagttacaaaaagtcaaaaaaacac
aagaaaaagagcaagaagagaagacacaagtctgactcgccagaatctgatattgaacga
gaaaaagacaaaaaagagagagagcgagagagcgaaaaggatagagccagacaaagatcg
gaatcaaaacataaatctcctactaaaaaacggcctggaaaggattctgggaactgggac
acgtcgggcagcgagctgagcgaaggggagctggaaaaacagaggaggactcttttggaa
caactggatgaagatcaatga
DBGET
integrated database retrieval system
