KEGG   Numenius arquata (Eurasian curlew): 141464326
Entry
141464326         CDS       T11436                                 
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
  KO
K12879  THO complex subunit 2
Organism
narq  Numenius arquata (Eurasian curlew)
Pathway
narq03013  Nucleocytoplasmic transport
narq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:narq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141464326 (THOC2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    141464326 (THOC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:narq03019]
    141464326 (THOC2)
   03041 Spliceosome [BR:narq03041]
    141464326 (THOC2)
Messenger RNA biogenesis [BR:narq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     141464326 (THOC2)
Spliceosome [BR:narq03041]
 Complex C
  Other components
   EJC/TREX
    141464326 (THOC2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    141464326 (THOC2)
SSDB
Other DBs
NCBI-GeneID: 141464326
NCBI-ProteinID: XP_074003257
LinkDB
Position
5:complement(10916913..10965869)
AA seq 1637 aa
MDRRAPSPRVRRVRVPSCLAGRCVPSDPGPLLHHPGSRRHTGKMAALLPAEWIKNWEKGG
KNEFVQLCRVLSENRSHDNMGFRDIQQALYELAYHVVRGNLKHDQASNVLGDVIEFREDM
PSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQ
SQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSLI
GCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQDPSG
ETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVVLSS
EKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQSIMDQMPPFYATSHKPIA
IALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADSFEDLRKEVFNMLCYLGP
HLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMEILFSCLLSITDQVLLPSLSLMDC
NACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKEN
VKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEAL
ANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILK
EVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLAL
PLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSI
DVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVMAPV
HDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQEMP
PNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQL
CIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYG
RFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKW
HYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRP
DLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVAATVQNGPGGAGMPTSLTINTVR
LEEGTTEEADKLKEKSQGVVKVINKAVNATPKVTTSNGNSASNSKIIKEKDDKEKSGKEK
DKEKKDKTPAATPEMKALGKDGKDKPKEERANKEDKAREIKEKTPKSDKEKEKVKKEEKA
SKEEKSKTVVTIVESKSTAEKEREKEPSRERDVAKEIKSKENAKGGEKMPVAGSLKSPVP
RSETSESEREQKRRKVDTHSSPSHSSTVKDNINELKDSSAKHYINHTTPTLSKSKEREVD
KKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSE
SPSDSPRLNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKTEKKEKRDS
TGGKEEKKHHKSSDKHR
NT seq 4914 nt   +upstreamnt  +downstreamnt
atggatcggcgcgcgccgtctcccagggtacggcgcgtccgcgtcccgtcgtgcctcgcg
ggccgttgcgtcccctctgacccggggccgttgctccaccatccgggctctcggcgccac
acggggaagatggcggcgctgctccctgccgagtggataaagaactgggagaaagggggc
aagaacgagtttgtgcaactatgtcgtgttctcagtgaaaacagaagccatgataatatg
ggtttcagagatatccagcaggctttgtatgagcttgcataccatgttgtcagaggaaac
ttaaagcatgatcaagcttctaatgttctcggtgatgtcatagaatttcgggaagacatg
ccttccatcctagctgatgtgttctgcatattagatattgaaacaagttgtttagaagaa
aaaagtaagagggatcattttacccaactggtattagcctgtttgtatcttgtatctgac
acggtcctaaaggagcgtttagatccagagacactggagtcattaggacttatcaagcag
tctcagcagttcaatcagaaatctgttaaaataaagacaaaactattttataagcaacag
aagtttaatttgttaagagaggagaatgaaggttatgcaaagctcattgcagaacttggg
caagacttatctggaaatatcactagtgatttaatccttgaaaacatcaaatctttaata
ggatgtttcaaccttgatcctaacagagttttggatattatcctagaagtctatgagtgc
aggcctgagtatgatgacttctttgtaccactgatagagtcttacatgtacatgtgtgaa
cctcaaactctatgccatatccttgggttcaaattcaaattttatcaggatccaagtggt
gagacaccttcctccttatacagagttgctgctgtccttttgcaacataatctcatagat
ttggaagatctttatgttcatcttcttccaggggataatgccatcattgaggaacacaaa
cgagagatagtagaagctaagcaaattgtcagaaaacttacaatggttgtcttatcctct
gaaaagactgaggaaaaggagaaggaaaaagaaaaagaagaggagaaaactgaaaagcct
cctgataatcaaaagcttggtttgttggaagctttattaaaaattggtgattggcagcat
gcacaaagtattatggatcagatgcctccgttttatgctacttcacacaagcctattgca
attgccctttgccagcttgtgcatgtgacaattgaaccactgtaccgcagagttggtgta
cctaaaggagctaaagggtcaccaatttcttctttgccaaacaagagagcaccaaaacaa
gcagacagctttgaggacttgagaaaggaagtgttcaacatgctttgttaccttggtcct
catctctcccatgatcccattttatttgcgaaagtggtgcgccttggaaaagcatttatg
aaagagtttcaatctgatggaagcaaacaagaagataaagagaaaatggagatactgttt
agctgtttgttgagtattactgatcaagttttacttccatctctttctttgatggactgc
aatgcatgcatgtctgaggaattatggggaatgttcaaaacttttccataccagtaccgg
taccgtctctatgggcaatggaagaatgaaacatacaatagtcacccacttctagtgaaa
gttaaagctcagaccatagaccgagccaaatatatcatgaagcgtttaactaaggaaaat
gtgaaaccctctggaagacaaattgggaagctcagccacagcaatcctacaattttattt
gattatattttatcacaaatacaaaaatatgataacttaataactccggttgttgattca
ctgaaatacctcacttcgctgaactatgatgtcttggcgtactgtattattgaagctctg
gcaaaccccgagaaggagagaatgaagcatgatgacactacaatctcaagctggctgcag
agtctggctagcttctgtggcgcagttttccgaaaatacccaattgaacttgctggtcta
cttcaatatgtagccaaccaactgaaagctgggaaaagctttgatttgcttattttaaaa
gaggtagtgcagaagatggcagggatagaaattacagaagaaatgacaatggaacaatta
gaagccatgactggtggagaacaactaaaagctgagggtggatactttggccaaatcaga
aatacaaagaaatcttctcagagattgaaagatgcgttattggaccatgatcttgccctt
ccactgtgcctgcttatggctcaacagagaaacggtgtgatctttcaagaaggaggggaa
aaacatctgaagctggtgggaaaactgtatgatcagtgccatgacaccctggtacaattt
ggtgggtttttagcatctaatttaagcacagaggattacattaagcgagtgccttctatt
gatgttctctgtaatgagtttcacacacctcatgatgctgcatttttcctctcgagaccc
atgtatgcgcaccatatttcatcgaagtatgatgaactaaaaaaagctgagaagggaaat
aaacagcagcacaaagttcacaaatacatcacatcgtgtgaactggtgatggctcccgtt
catgatgctgtgatttctttgcaccttcccaaggtttgggatgacatcagtcctcagttt
tatgctacgttctggtctttgacaatgtatgaccttgccgtcccacatagtagctatgac
agagaagtcaataaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcct
ccaaataaaaagaaaaaagaaaaggaacgttgcacagcgcttcaggacaagctccttgaa
gaggagaagaaacagttggagcatgtgcagagggttcttcagagactgaaactagagaag
gataactggctcctcgcaaagtctaccaaaaatgagactatcacaaaatttttgcagtta
tgtatatttcctcgatgcattttttcggcaatcgatgcagtttattgcgctcactttgta
gaactggtgcatcagcagaaaacacctaacttctccactcttctgtgctatgaccgagtt
ttctctgatattatatatacagttgcaagttgcactgaaaatgaagctagtagatacggc
aggtttttatgctgtatgctggagactgtgactagatggcacagtgacagagttatatat
gaaaaggaatgtggcaactatccaggcttcctgactatattacgggcaactggatttgat
ggtggaaataaagctgatcaattggattacgagaattttagacatgtggtacacaaatgg
cactataaattaactaaggcttctgtgcactgccttgaaacaggtgaatatacacatatc
agaaatatcctgattgtgctgaccaaaatccttccgtggtacccaaaagtgctgaacctg
ggccaagccttggaaagaagagtacataagatatgtcaggaagagaaagagaagagacct
gatctatatgcattggctatgggctattctgggcagttgaaaagtaggaagcctttcatg
atacctgaaaatgaattccaccacaaagacccacctgccaggaatgctgtagctgcaaca
gtacaaaatgggccaggtggtgctgggatgcctacatctctcacaataaatacagttcga
ctggaagaaggcactactgaggaggctgataaactaaaggagaagtctcagggtgtggtg
aaagttattaataaagccgtcaacgctacaccgaaggtgacaacaagcaatggaaacagt
gcttctaatagcaaaattattaaagagaaagatgataaagaaaaaagcgggaaggaaaaa
gataaagaaaaaaaagacaagactccagctgccactccagagatgaaggcacttgggaag
gatgggaaagataaaccaaaggaagaacgggcaaacaaagaggataaagcaagagagatc
aaggagaaaacgccaaaatcagacaaagagaaggaaaaagtcaagaaagaagaaaaagct
tcaaaagaagaaaaatccaagacagttgttaccatcgttgagtcaaagtcaactgcagaa
aaggagagagaaaaggagccatccagagaaagagatgtagcaaaggaaataaaatccaag
gaaaatgctaaaggaggagaaaagatgccagtagctgggtccttgaagtcacctgttccc
cgatcagaaacatcagaatctgagagggaacaaaaacgccgcaaagttgatacacattct
tctccatcacattcctcaacagtaaaggacaacatcaacgaactcaaggactcttcagca
aagcactacattaaccacactactccaacactgtccaagagtaaggagagagaagtggac
aagaaagatttggacaagtcaagggaaagatccagagagagagagaagaaagatgaaaag
gacaggaaagatcgaaaaagggatcattcaaacagtgaccgagaggtaccacaggattca
actaaacgacgcaaagaagaaaatgggacaactggttcttcaaaacatagtaaaagtgaa
agtccttctgattcccctcgcttaaatgaaaaggagaaggagaagaacaaatctaagtct
tcaggaaaagagaaaggtgattcaattaaagcagaaaagatggagaaaagttcctctggt
agcaaaaaggaatcaagacatgataaagaaaaaacagaaaagaaagaaaaacgagacagt
actggagggaaggaagaaaagaaacatcataaatcttcagacaagcacagataa

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