Numenius arquata (Eurasian curlew): 141464326
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Entry
141464326 CDS
T11436
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq03013
Nucleocytoplasmic transport
narq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141464326 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
141464326 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
narq03019
]
141464326 (THOC2)
03041 Spliceosome [BR:
narq03041
]
141464326 (THOC2)
Messenger RNA biogenesis [BR:
narq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
141464326 (THOC2)
Spliceosome [BR:
narq03041
]
Complex C
Other components
EJC/TREX
141464326 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
141464326 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141464326
NCBI-ProteinID:
XP_074003257
LinkDB
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Position
5:complement(10916913..10965869)
Genome browser
AA seq
1637 aa
AA seq
DB search
MDRRAPSPRVRRVRVPSCLAGRCVPSDPGPLLHHPGSRRHTGKMAALLPAEWIKNWEKGG
KNEFVQLCRVLSENRSHDNMGFRDIQQALYELAYHVVRGNLKHDQASNVLGDVIEFREDM
PSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQ
SQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSLI
GCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQDPSG
ETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVVLSS
EKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQSIMDQMPPFYATSHKPIA
IALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADSFEDLRKEVFNMLCYLGP
HLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMEILFSCLLSITDQVLLPSLSLMDC
NACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKEN
VKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEAL
ANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILK
EVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLAL
PLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSI
DVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVMAPV
HDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQEMP
PNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQL
CIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYG
RFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKW
HYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRP
DLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVAATVQNGPGGAGMPTSLTINTVR
LEEGTTEEADKLKEKSQGVVKVINKAVNATPKVTTSNGNSASNSKIIKEKDDKEKSGKEK
DKEKKDKTPAATPEMKALGKDGKDKPKEERANKEDKAREIKEKTPKSDKEKEKVKKEEKA
SKEEKSKTVVTIVESKSTAEKEREKEPSRERDVAKEIKSKENAKGGEKMPVAGSLKSPVP
RSETSESEREQKRRKVDTHSSPSHSSTVKDNINELKDSSAKHYINHTTPTLSKSKEREVD
KKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSE
SPSDSPRLNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKTEKKEKRDS
TGGKEEKKHHKSSDKHR
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggatcggcgcgcgccgtctcccagggtacggcgcgtccgcgtcccgtcgtgcctcgcg
ggccgttgcgtcccctctgacccggggccgttgctccaccatccgggctctcggcgccac
acggggaagatggcggcgctgctccctgccgagtggataaagaactgggagaaagggggc
aagaacgagtttgtgcaactatgtcgtgttctcagtgaaaacagaagccatgataatatg
ggtttcagagatatccagcaggctttgtatgagcttgcataccatgttgtcagaggaaac
ttaaagcatgatcaagcttctaatgttctcggtgatgtcatagaatttcgggaagacatg
ccttccatcctagctgatgtgttctgcatattagatattgaaacaagttgtttagaagaa
aaaagtaagagggatcattttacccaactggtattagcctgtttgtatcttgtatctgac
acggtcctaaaggagcgtttagatccagagacactggagtcattaggacttatcaagcag
tctcagcagttcaatcagaaatctgttaaaataaagacaaaactattttataagcaacag
aagtttaatttgttaagagaggagaatgaaggttatgcaaagctcattgcagaacttggg
caagacttatctggaaatatcactagtgatttaatccttgaaaacatcaaatctttaata
ggatgtttcaaccttgatcctaacagagttttggatattatcctagaagtctatgagtgc
aggcctgagtatgatgacttctttgtaccactgatagagtcttacatgtacatgtgtgaa
cctcaaactctatgccatatccttgggttcaaattcaaattttatcaggatccaagtggt
gagacaccttcctccttatacagagttgctgctgtccttttgcaacataatctcatagat
ttggaagatctttatgttcatcttcttccaggggataatgccatcattgaggaacacaaa
cgagagatagtagaagctaagcaaattgtcagaaaacttacaatggttgtcttatcctct
gaaaagactgaggaaaaggagaaggaaaaagaaaaagaagaggagaaaactgaaaagcct
cctgataatcaaaagcttggtttgttggaagctttattaaaaattggtgattggcagcat
gcacaaagtattatggatcagatgcctccgttttatgctacttcacacaagcctattgca
attgccctttgccagcttgtgcatgtgacaattgaaccactgtaccgcagagttggtgta
cctaaaggagctaaagggtcaccaatttcttctttgccaaacaagagagcaccaaaacaa
gcagacagctttgaggacttgagaaaggaagtgttcaacatgctttgttaccttggtcct
catctctcccatgatcccattttatttgcgaaagtggtgcgccttggaaaagcatttatg
aaagagtttcaatctgatggaagcaaacaagaagataaagagaaaatggagatactgttt
agctgtttgttgagtattactgatcaagttttacttccatctctttctttgatggactgc
aatgcatgcatgtctgaggaattatggggaatgttcaaaacttttccataccagtaccgg
taccgtctctatgggcaatggaagaatgaaacatacaatagtcacccacttctagtgaaa
gttaaagctcagaccatagaccgagccaaatatatcatgaagcgtttaactaaggaaaat
gtgaaaccctctggaagacaaattgggaagctcagccacagcaatcctacaattttattt
gattatattttatcacaaatacaaaaatatgataacttaataactccggttgttgattca
ctgaaatacctcacttcgctgaactatgatgtcttggcgtactgtattattgaagctctg
gcaaaccccgagaaggagagaatgaagcatgatgacactacaatctcaagctggctgcag
agtctggctagcttctgtggcgcagttttccgaaaatacccaattgaacttgctggtcta
cttcaatatgtagccaaccaactgaaagctgggaaaagctttgatttgcttattttaaaa
gaggtagtgcagaagatggcagggatagaaattacagaagaaatgacaatggaacaatta
gaagccatgactggtggagaacaactaaaagctgagggtggatactttggccaaatcaga
aatacaaagaaatcttctcagagattgaaagatgcgttattggaccatgatcttgccctt
ccactgtgcctgcttatggctcaacagagaaacggtgtgatctttcaagaaggaggggaa
aaacatctgaagctggtgggaaaactgtatgatcagtgccatgacaccctggtacaattt
ggtgggtttttagcatctaatttaagcacagaggattacattaagcgagtgccttctatt
gatgttctctgtaatgagtttcacacacctcatgatgctgcatttttcctctcgagaccc
atgtatgcgcaccatatttcatcgaagtatgatgaactaaaaaaagctgagaagggaaat
aaacagcagcacaaagttcacaaatacatcacatcgtgtgaactggtgatggctcccgtt
catgatgctgtgatttctttgcaccttcccaaggtttgggatgacatcagtcctcagttt
tatgctacgttctggtctttgacaatgtatgaccttgccgtcccacatagtagctatgac
agagaagtcaataaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcct
ccaaataaaaagaaaaaagaaaaggaacgttgcacagcgcttcaggacaagctccttgaa
gaggagaagaaacagttggagcatgtgcagagggttcttcagagactgaaactagagaag
gataactggctcctcgcaaagtctaccaaaaatgagactatcacaaaatttttgcagtta
tgtatatttcctcgatgcattttttcggcaatcgatgcagtttattgcgctcactttgta
gaactggtgcatcagcagaaaacacctaacttctccactcttctgtgctatgaccgagtt
ttctctgatattatatatacagttgcaagttgcactgaaaatgaagctagtagatacggc
aggtttttatgctgtatgctggagactgtgactagatggcacagtgacagagttatatat
gaaaaggaatgtggcaactatccaggcttcctgactatattacgggcaactggatttgat
ggtggaaataaagctgatcaattggattacgagaattttagacatgtggtacacaaatgg
cactataaattaactaaggcttctgtgcactgccttgaaacaggtgaatatacacatatc
agaaatatcctgattgtgctgaccaaaatccttccgtggtacccaaaagtgctgaacctg
ggccaagccttggaaagaagagtacataagatatgtcaggaagagaaagagaagagacct
gatctatatgcattggctatgggctattctgggcagttgaaaagtaggaagcctttcatg
atacctgaaaatgaattccaccacaaagacccacctgccaggaatgctgtagctgcaaca
gtacaaaatgggccaggtggtgctgggatgcctacatctctcacaataaatacagttcga
ctggaagaaggcactactgaggaggctgataaactaaaggagaagtctcagggtgtggtg
aaagttattaataaagccgtcaacgctacaccgaaggtgacaacaagcaatggaaacagt
gcttctaatagcaaaattattaaagagaaagatgataaagaaaaaagcgggaaggaaaaa
gataaagaaaaaaaagacaagactccagctgccactccagagatgaaggcacttgggaag
gatgggaaagataaaccaaaggaagaacgggcaaacaaagaggataaagcaagagagatc
aaggagaaaacgccaaaatcagacaaagagaaggaaaaagtcaagaaagaagaaaaagct
tcaaaagaagaaaaatccaagacagttgttaccatcgttgagtcaaagtcaactgcagaa
aaggagagagaaaaggagccatccagagaaagagatgtagcaaaggaaataaaatccaag
gaaaatgctaaaggaggagaaaagatgccagtagctgggtccttgaagtcacctgttccc
cgatcagaaacatcagaatctgagagggaacaaaaacgccgcaaagttgatacacattct
tctccatcacattcctcaacagtaaaggacaacatcaacgaactcaaggactcttcagca
aagcactacattaaccacactactccaacactgtccaagagtaaggagagagaagtggac
aagaaagatttggacaagtcaagggaaagatccagagagagagagaagaaagatgaaaag
gacaggaaagatcgaaaaagggatcattcaaacagtgaccgagaggtaccacaggattca
actaaacgacgcaaagaagaaaatgggacaactggttcttcaaaacatagtaaaagtgaa
agtccttctgattcccctcgcttaaatgaaaaggagaaggagaagaacaaatctaagtct
tcaggaaaagagaaaggtgattcaattaaagcagaaaagatggagaaaagttcctctggt
agcaaaaaggaatcaagacatgataaagaaaaaacagaaaagaaagaaaaacgagacagt
actggagggaaggaagaaaagaaacatcataaatcttcagacaagcacagataa
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integrated database retrieval system