Numenius arquata (Eurasian curlew): 141466046
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Entry
141466046 CDS
T11436
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq04140
Autophagy - animal
narq04142
Lysosome biogenesis
narq04145
Phagocytosis
narq04148
Efferocytosis
narq05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
141466046 (VPS18)
04142 Lysosome biogenesis
141466046 (VPS18)
04140 Autophagy - animal
141466046 (VPS18)
04148 Efferocytosis
141466046 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141466046 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
narq04131
]
141466046 (VPS18)
Membrane trafficking [BR:
narq04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
141466046 (VPS18)
Hops complex
141466046 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
aq_1631
zf-RING_16
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-RING_UBOX
zf-ANAPC11
zf-RING_2
zf_RING_Vps8
DUF8221
Nup54_57_C
LETM1_C
STX17_N
RBSN_mid
DUF5600
zf-rbx1
DUF1664
Motif
Other DBs
NCBI-GeneID:
141466046
NCBI-ProteinID:
XP_074005859
LinkDB
All DBs
Position
6:41902244..41915588
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLYRSASVQQSRASVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTAQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAMHADHLPSFREFPANLGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDERVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFQ
EKFGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGILEGDPSQRNLYLDTRERFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHHACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKSHHRPKDADTISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWM
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatcctggacgagtacgaagattccctctaccgctccgcctccgtacagcag
agccgcgccagcgtgggcattccccactccggatatgtgaatgcacggctggagaaggaa
acaccaatatttaacaagcaaaggattgattttgctcctccagagaaaattaacagctta
gtggtctcgtctaaccagctctgtatgagccttggcaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcatctactgattgctctgaataccagtgaa
tgcctttacctgaacagaagtgttcagaaagtgcgagcgctctcccgctggaaaggccac
ttgattgaaagcgtgggctggaacaaatttcttggttcagagaccaacactgggcctatc
ctggtggggacagcccaggggcagatctatgaggctgaaatctctgtcagcgagggaagc
ctcttcagcactaaccccgaccagtacttccgacaggtctacactctggaggaggaatcg
ggacctgccccagtctgctgcttggagattgaacgaggcatagaagggaagttttttatt
atagccaccactcgaaagagactcttccagtttgttggcaaagtgcctgaagggacggag
cagcaaggcttcagctccatatttgctatgcatgctgaccatttgcccagcttccgggag
tttccggccaaccttggtttcagtgagatagccttttacaccccaaaactgcgttccaac
ccacgctcctttgcttggatgatgggaaatggtgttttatatggtacattggattatagc
cgccctgattcaattttgagtgatgaacgggtctgggtttatccttctgatattgacata
actgtgaacaagccaatatccattgtgcttacccagttccacttcctcttgctgctgcct
gatcgggtgaaggctgtatgcactctgaatgggcaggttgtttttcaagatctgttccag
gagaagtttggcttactgacacgcatgatcaaagatcccacagtccagcagatctggatc
cacactgagaaagtagtgttccgctaccatgtccagcgggaatctagagatgtgtggaag
atgtatatgaatatgaacaaatttgatttagccaaagagtactgtaaagaccgtccagag
tgtctagatattgtgctggcaaaagaggcagagcactgcttccaaaataagaggtatcta
gacagtgccaaatgttatgcactgacccagaactacttcgaggaaattgcccttaagttc
attgaagccaagcaagaagaggccctgatggagtttctgattaagaagctaagtaaccta
aagccttctgagaagacacagaccactctgttgaccacgtggttaacggagctctacctg
aactggctgggcatattggaaggagatccctcacagcgaaatctctatttggatacacgg
gagaggtttcgcactttcctgagcagtcctaaaaacaaagactgtctgtttaataaccgg
gcatctatttatgagctgttggcaagccatggggacacagagcacatggtctactttgca
gttatcatgcaggactatgagcgcgtagtagctcaccactgccagcacgatgagtacgat
gaagctctaaatgtgctgtccaggcacagagacgagaagctgttctacaagttctctcca
gtcctcatccagcatattcccaagaaggtggttgacgcttggatttctatgggctctaga
ctggatgccaggaacctcattccagcccttgttaactacagccagagtgccagcacccag
cagatcaatgaagccattagatatatggagttctgtgtctatcagttggaggaaacccag
caagccattcacaactacctgttgtctctttatgctttgtgtcggccagactcgctgctg
tcatacctggagcaagcaggaaccaacccaaacaggatccactatgacctgaagtatgca
ttgcgcctgtgtgcagagcatgggcaccaccatgcatgtgtccatatttacaaagtgatg
gaattgtatgaggaggctgtggatctcgccttacaggtggatgttgatcttgccaagtcc
tgtgcagatctccctgaagatgatgaggagctccggaagaagctctggttgaagattgct
cgccatgttgttcaggaagagaaggatgtcaagaaggcaatggcctgtctctccagctgt
gccctgctgaagattgaagatgtcctgccattctttccagacttcgtcaccattgaccat
ttcaaggaggcaatctgtaactccctggaggactacaacaagcacattgaggagctgaaa
agggagatggaggaagccacacagagtgccaagagaatccgagaggacatccaggaaatg
agaaataagtatggctctgtggagcctcaggaaaaatgtgctgcttgtgacttcccgctt
ctaaaccgccctttttaccttttcctgtgtggtcacatgtttcactatgactgtctcctc
caagcagttttcccaaaccttcctgcctataagcaggcaaaactcgaagatcttcagaaa
aaactggcagctaccagtcagccttccaagagccaccatcgtcccaaggacgcagatacc
attagcttggggaaggggcagcagagccgggaacagatcaaagctgacattgacgatatt
gtggcagctgaatgcgtgtactgtggtgagctgatgatccggtccattgacaaacctttt
attgatccccaaaagtatgaagaggagatgcaaagctggatgtag
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