Numenius arquata (Eurasian curlew): 141466843
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Entry
141466843 CDS
T11436
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
narq Numenius arquata (Eurasian curlew)
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
narq03019
]
141466843 (TRIM71)
04121 Ubiquitin system [BR:
narq04121
]
141466843 (TRIM71)
Enzymes [BR:
narq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141466843 (TRIM71)
Messenger RNA biogenesis [BR:
narq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141466843 (TRIM71)
Ubiquitin system [BR:
narq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
141466843 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-B_box_Trim66
zf-C3HC4
zf-RING_UBOX
SARAF
DUF4094
Motif
Other DBs
NCBI-GeneID:
141466843
NCBI-ProteinID:
XP_074007049
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All DBs
Position
7:44384001..44438587
Genome browser
AA seq
888 aa
AA seq
DB search
MASFPESDFQICPLCKEMCGSPAPLSSNSSTSSSSSQTSSSSGGGGGGGGGGSSCGGPPR
RLHVLPCLHAFCRQCLEAQRHPGAGDALKLRCPICDQKVVISEPSGMDALPSSNFLLSNL
LDVVVVAAAAEEQKNGRATGTGPAAGSGAGGGGGGGGNNRHHGRPPPPHRAAGSSPAAAA
SAAPSSTSSSSSSSGGGGSAALLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNC
VRAHQRVRLTKDHFIERFAAAGPGPAGGPAAPLALSPPYTTASPYNILSVFPDRASYCQH
HDDEVLHFYCDTCSVPICRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQ
LSIEQAQAVAEQVEMKAKVVQSEVKAVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQ
VEKLRQNLNKLDNTISAVQQVLEEGRTMDILLARDRMLAQVQELKNVRGLLQPQEDDRIM
FTPPDQALYMAIKSMGFVSSGAFAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSG
GDMISAVVMGPDGNLFGADVSDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVVV
KSGRSYIGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFH
HKFGTLGSRPGQFDRPAGVACDISRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQF
NYPWDVAVNAEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGH
LVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQI
FESNGSFLCKFGTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttcccgagtccgacttccagatctgcccgctgtgcaaggagatgtgcggc
tcgccggctcccctctcctccaactcctccacctcctcctcctcctcgcagacctccagc
tcctccggggggggcggcggcggtggcggcggcggctcctcctgcgggggcccgccgcgg
cggctccacgtcctgccctgcctgcacgccttctgccgccagtgcctggaggcgcagcgg
caccccggcgcgggggacgccctcaagctgcgctgccccatctgcgaccagaaggtggtg
atctcggagccctcgggcatggacgcgctgccctcctccaacttcctcctcagcaacctg
ctggacgtcgtcgtcgtggccgccgccgccgaggagcagaagaacggtcgagccaccggg
accggccccgccgcgggctccggtgcgggaggaggaggcggcggcggcggtaacaaccgc
caccacggccgcccgccgccgccccaccgcgccgccggctcctcgcccgccgccgccgcc
tcggccgcgccctcctcgacgtcgtcgtcctcctcctcctcgggcggcggcggctcggcg
gctctcctgctgcggcggccccacagccggcagggcgagccccgctgcagctcctgcgac
gaaggcaacgccgccagctcccgctgcctcgactgccaggagcacctgtgcgacaactgc
gtgcgggcgcaccagcgcgtccgcctcaccaaggaccacttcatcgagcgcttcgccgcc
gccggacccggccctgccggtggccccgccgcgccgctcgccctcagcccgccctacacc
accgcctcgccctacaacatcctctccgtcttccccgaccgggccagctactgccagcac
cacgacgacgaggtactgcatttctactgtgatacctgttctgtccccatttgtcgggaa
tgtaccatgggacgacatgtgggtcacagctttatctacctccaagatgccctccaggac
tccaggactctcactattcagctcctggcagatgctcagcaaggacgacaggctattcaa
ctgagtattgaacaggcccaggctgtggcagagcaggttgagatgaaagcgaaggtggta
cagtctgaagtcaaagcagtgactactaggcataagaaggccttggaagagcgggagtgt
gagctgctctggaaggtggaaaagattcgtcaagtcaaggctaagtcactctacttgcaa
gttgaaaagttacgtcagaacctaaataagctggacaacaccattagtgctgttcagcag
gtcctggaggagggtcgtaccatggatattcttctggctcgggaccgcatgctggctcaa
gtgcaggagctgaagaatgtgagaggccttctccagccgcaggaagatgacaggatcatg
ttcactccccctgaccaggcattgtatatggccattaaatcaatgggctttgtcagcagt
ggggcttttgctcctctgaccaaagccactggggaaggcctcaagcgtgcactgcagggc
aaagtggcctctttcacagtgataggatacgaccacgatggtgagcctcgcctttcagga
ggtgacatgatctctgcagtggtgatgggcccggatggaaaccttttcggggcagatgtc
agtgatcagcagaatgggacatacctggtcagctaccgtccacagctagagggagagcac
ctggtctccgtgatgatgtgcaaccaacacattgagaacagccccttcaaagttgtggta
aaatctgggcgtagctacataggcattgggctgccagggctctcctttggcagtgaggga
gacagcgacggcaaactctgccgcccctggggggttagtgtagacaaagaaggctacatc
attgttgctgaccgcagtaataaccgcatccaggtgttcaaaccatgcgggaccttccat
cacaagtttggcacgctgggctcccggccaggccagtttgatcgccctgccggtgtggcc
tgtgacatctcacgtaggatcgtggtggctgacaaggacaatcatcgcatccagatcttc
acatttgaggggcagttcattctgaagtttggggagaaaggaacaaagaatgggcaattc
aattacccatgggatgtggctgtcaacgcagagggcaagatcctggtctctgacacgagg
aaccatcgcgttcagctgtttgggcccgatggtgtgtttcttaacaagtatggcttcgaa
ggggcactctggaagcactttgattcccccagaggtgtgactttcaatcacgagggccac
ttggtcgtgactgacttcaacaaccatcgccttctggtcatccatccagattgccagtca
gcacgctttctgggctcggagggcaccgggaacggccagttcctgcgcccacagggagtg
gcggtggatcaagaggggcgcatcatcgtggctgattccaggaaccaccgggtgcagata
tttgagtcaaatggtagctttttatgcaagtttggcactcagggaagcggctttggtcag
atggaccgtccttcaggtatagccgtcacccctgatggcatgattgttgtggtcgacttt
ggaaacaatcgaattctggtcttctaa
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