Numenius arquata (Eurasian curlew): 141468098
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Entry
141468098 CDS
T11436
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq00100
Steroid biosynthesis
narq01100
Metabolic pathways
Module
narq_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
141468098 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
narq01006
]
141468098 (FDFT1)
Enzymes [BR:
narq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
141468098 (FDFT1)
Prenyltransferases [BR:
narq01006
]
Terpene biosynthesis
Squalene/phytoene synthase
141468098 (FDFT1)
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NCBI-GeneID:
141468098
NCBI-ProteinID:
XP_074009018
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Position
9:complement(58356528..58372243)
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AA seq
455 aa
AA seq
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MAASTKAVSLFKRTLALSPPRGPPRALGRLRGGGRRVQQRGGVAAASAPPPAPPPAAPRL
QPPPRTPLCPQDSLGRGLRTCYRYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTI
EDDMSISLDVKVPMLHEFHSYLYQPEWKYMESKEKDRQVLEDFPTISMEFRNLSKVYQEV
ISDICHKMGVGMAEFLEKKVDSQHEWDKYCHYVAGLVGIGLSRLFSASELEDPIVGQDTE
LANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRYAKKLSDLAKPENIDMAVQCLNEL
ITNALHHVPDVLTYLSRLRNQSVFNFCAIPQVMAIATLAACYNNKQVFRGVVKIRKGQAV
TLMMDATNIQAVKAIMYQYVEEIYQKIPSTDPSSNKTQQVIASIRAMSLPGGPMASRHHY
SPIYLSCAMLLAALSWQYLSTISKATEEYVQAGEN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagcaccaaagccgtgtccctcttcaagcggaccctggccctgtccccgccg
cggggtcccccccgggctctggggcggctgcggggcggcgggcggagggtgcagcagcgg
gggggtgtcgccgccgcctccgcaccccccccggccccgccgccggccgccccccgcctt
cagccgcccccccgcaccccgctgtgcccgcaggactcgctgggacgcggcctccggacc
tgctaccgctacctcaaccagaccagccgcagcttcgccgccgtcatccaggccctggac
ggagagctgcgacatgccgtctgtatattctacctggttctccgtgccctggacactata
gaggatgacatgtccatcagcttggatgtgaaggtcccgatgctgcacgagtttcactcc
tatctctatcaacccgagtggaaatacatggagagcaaggagaaggaccggcaggtgctg
gaagacttcccaacgatctccatggagttcaggaacctgtcaaaggtctaccaggaggtg
atttcagatatttgccacaagatgggtgtcgggatggcggagtttttggagaagaaagtc
gactctcagcacgagtgggataagtactgtcactacgttgctgggctggtggggatcggc
ctttcccgtctcttctctgcatcagagctagaagatcctattgtcgggcaggacacggag
ctggccaactccatgggcctcttcctgcagaaaaccaacatcatccgtgactatctggag
gaccagctggagggaagggagttctggcccagagaggtttggagcaggtacgcaaagaag
ctctcggatcttgccaaaccagagaacatcgatatggctgtccagtgtctgaatgagctc
atcaccaacgccctccaccacgtccctgatgtcctcacatacttatcccgcctgagaaac
caaagcgtcttcaacttctgcgctatcccccaggtgatggctattgccacattggctgcc
tgctataacaacaagcaggtcttcaggggtgttgtgaagatccggaagggacaagctgtc
actttgatgatggatgccacaaacatacaagctgtcaaagccatcatgtaccagtatgtg
gaagagatctaccagaagatcccaagcacggacccgtcatccaacaagacgcagcaggtc
atcgcctccatccgtgccatgagcttgcccggcggccccatggcatcacgccaccactac
tcccccatctacttgtcgtgcgccatgctcctggctgccctgagctggcagtacctgagc
accatctccaaggccaccgaggagtacgtccaggcgggcgagaactga
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