Numenius arquata (Eurasian curlew): 141468499
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Entry
141468499 CDS
T11436
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq04382
Cornified envelope formation
narq04510
Focal adhesion
narq04512
ECM-receptor interaction
narq04518
Integrin signaling
narq04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141468499 (COL4A4)
04518 Integrin signaling
141468499 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141468499 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141468499 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141468499 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
narq04147
]
141468499 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
narq00536
]
141468499 (COL4A4)
Exosome [BR:
narq04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
141468499 (COL4A4)
Glycosaminoglycan binding proteins [BR:
narq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141468499 (COL4A4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
141468499
NCBI-ProteinID:
XP_074009698
LinkDB
All DBs
Position
9:18686779..18751975
Genome browser
AA seq
1681 aa
AA seq
DB search
MALTKDSFERIKWLIIAAWWLLIVFSAQEIDGGGYAYIGPCGGQDCSVCRCFPEKGSRGQ
PGELGAQGPIGSLGSTGPAGLPGEKGQRGENGQPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGSEGPRGKPGLDGYNGSRGDPGFPGENGYSGPRGPYGNPGQKGEKGNSVYVSYFGKGPP
GNRGDPGPPGMPGPRGSRGTTGPSGYPGQPGLPGIPGYPGLPGEQGNPGIGVDGQKGEPG
DVGLPGPPGLPLLVGPPGAQLFKGEKGQKGLPGVTGYRGPRGPKGVLGRGEKGEKGIPGF
PGLQGDPGSYGPAGFPGMKGEMGFAGFPGQPGYPGMQGDPGEEGPPGPPGAVGTLLPPIK
GPQGDPGFPGPAGDLGSVGPIGPAGLLGRPGDDGTSLPGLPGVSGAPGPQGFRGDPGFPG
TGESIAGRPGLPGPPGLQGQPGRQGLPGLPSVICTDRGIPGEPGAKGQIGLPGRKGEKGE
KGNQGLCSCSAGPPGPRGMQGPPGTQGKKGQMGYPGRHGEKGDPGVSGAMGSPGLPGIPG
SAGQHGEKGEKGDPGRVRIKGIKGERGPTGVPGFPGQRGNDGRDGELGLPGEKGAEGDSG
IPLPGDKGFPGVPGLPGVKGQMGLPGLGFPGPPGVRGSPGDFGDTGSVGPPGPKGQKGET
VCITLPYPGNPGPPGFKGVQGPKGLKGLPGRPGPNGFDGQKGHRGRPGAGIPGPEGFRGK
AGDPGDEGERGSTVDGRNGPPGPPGIDGQKGVPGDTTYGPPGIPGNRGLPGPPGAQGARG
DPGVPGLRGQPGTPGFPGAKGFRGPEGDRGAPGCPGFPGPPCDPGLPGPPGLRGAMGLPG
LQGLPGFKGQRGDRGLAGPPGIKGLKGSPGSQGPQGPPGSRGLPGLPGNKGPPGFPGQPG
SKGIRGPQGFPGLPGTQGPMGISGVKGEEGKMGPPGPSGECGDMGLKGERGPPGDSGCIN
IRLEKGQKGEPGFPGENGFRGERGEKGNTGLRGTPGFPGKNGVPGLPGDHGDIGLMGFPG
AQGFPGPRGFKGIMGFQGQPGDQGDVGLSGIPGNPGLTGPKGSKGKRGDPTPLLGTQGRK
GPPGDPGLPGLCGFPGQKGSPGIQGQPGRPGSKGDPGYPGIPGFPGATGPQGLPGEPGEK
GKHGILGPPGLQGLPGSPGRKGLPGPPGLDGLDGLKGQKGSAGVPGQSETGPPGYPGELG
PKGDRGEPGWPGISIPGPPGERGFPGFPGRRGPAGPTGPMGKCPYSASPGPPGDQGPPGL
DGIRGQPGNPGPPGDTIFVRGDPGDIGIRGAPGNPGQRGQQGARGLPGNQGRRGPKGPMG
IHGPQGPPGATGQPGDQGFQGKPGPRGPPGFIGDPGEPGKIDDSCSAIPGPPGEAGQRGH
DGPVGLPGPIGHPGPQGRKGEEGSCGLRGQDGLPGAPGPPGDQGHVGEQGYAGPQGPPGQ
TGIPGPPGPHIRSASGFLLVLHSQSDREPLCPQGMPKLWTGYSLLYLEGQEKAHNQDLGL
AGSCLPVFNTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPMTPLSEEEIQPYISRCAVC
EAPAQAVAVHSQDQSIPPCPVNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSA
PFIECQGQRGTCQFFANEYSFWLTTVMPELQFASAPMSGTLKEGQEQRKKISRCQVCLRH
G
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacaaaggattcgtttgaacggattaagtggcttatcatagctgcctggtgg
ctactgattgttttttcagcacaagaaattgatgggggaggatatgcatatattggccca
tgtgggggacaggattgttcagtttgccggtgctttccagaaaaaggatcaagaggtcag
cctggtgagttgggagctcagggtccgattgggtccttgggatctacaggaccagctggt
ctgccaggggaaaaaggacagaggggtgagaatgggcagcccgggccagctggagaaaaa
ggggataagggcccaactggagtcccaggatttcctggtttagatggtgttccaggatta
ccaggaagtgaaggacccaggggcaagcctggtttagatggctacaatggctctagagga
gatccaggatttccaggcgaaaatggctatagtggaccaagaggtccttatggaaatcca
ggacaaaaaggagaaaaaggaaattcagtgtatgtttcatattttggaaaaggacctcca
ggaaacagaggagatcctggtccccccggcatgcccggacctagagggtcaagaggtaca
acgggcccatctggatacccaggacaaccaggcttgcctggtattccaggttaccctggt
ttgccaggtgaacagggaaatccaggtattggagtggatggacaaaagggggagccgggt
gacgttggacttcctgggccacctgggttaccactgttagttggacctcctggagctcag
ctgttcaaaggagaaaagggccaaaaaggactacctggagtaacaggatacagagggcca
cgtggacccaaaggtgtacttgggagaggagaaaaaggtgaaaagggcattcctggattc
cctggattgcagggtgatcctggttcttatggacctgcaggttttcctggaatgaagggg
gaaatgggatttgctggttttcctggacaacctggctatccaggcatgcagggggatcca
ggagaagaagggcctccaggtcctcctggagctgttggaactcttctgcctcctataaaa
ggtccacaaggagatcctggatttccaggtcctgctggtgatctggggtcagttggacca
attggtcctgcaggcctgctgggaagaccaggagatgatggaacaagtctgcctggcctg
ccaggagtaagtggggcaccaggacctcaaggttttcgaggtgaccctggtttccctgga
acaggtgaatcaattgcaggaagacctggacttcctggaccaccaggcctacagggacag
ccaggaagacaaggcttacctggactacccagtgtcatctgtactgacagagggatccct
ggagaacctggagcaaaaggtcagataggccttccaggaagaaaaggtgaaaaaggagaa
aagggaaatcaaggcctctgctcgtgtagcgctggtcctcctggtccccgtggtatgcaa
ggacctccaggtactcaaggaaagaaaggacaaatgggataccctggaagacatggggaa
aagggcgatccaggcgtatccggtgcaatgggatcaccagggctccctgggatacctggt
tctgctggacaacatggtgaaaaaggagagaagggagatccaggaagagttagaataaaa
ggaataaaaggtgaaagaggtcctactggggttccaggatttccaggccaaagaggtaat
gatggcagagatggggaactaggattgcctggggaaaaaggagctgagggagattctgga
ataccactgccaggtgataaaggattccctggggtcccaggacttcctggggtaaaagga
cagatgggattgcctggtttggggtttcctggccctccaggagtcagaggtagccctgga
gactttggtgatactggtagtgttgggccacctggtccaaagggccagaaaggtgagact
gtctgcattacgttaccataccctggaaatccgggtcccccaggttttaaaggtgttcaa
ggaccaaagggtttaaaaggactccccggtcgtcctggaccaaatggatttgatgggcaa
aaaggccatcgaggcaggccaggagcaggaatccctgggccagaaggctttcgaggcaaa
gctggtgatcctggtgatgaaggtgaaagaggatctacagttgatggcagaaatggccct
ccaggtccacctggcatagatggtcagaaaggtgttccaggtgataccacatatggtcct
ccaggaatcccaggcaacaggggactgccaggaccccctggtgcacaaggagcaaggggt
gatccaggcgttcctgggcttcgaggacagcctgggaccccaggatttccaggtgccaaa
ggttttaggggcccagaaggtgatagaggagcaccaggctgtccaggcttccctggtcca
ccatgtgacccgggcttaccagggccaccaggactcagaggtgccatgggcctgccagga
cttcaaggcttaccaggctttaaaggtcagagaggagacaggggcctagctgggccacca
ggaatcaaaggtctcaaaggctctcctggctcacaaggtccccaaggtcctccaggctcc
cggggacttccaggacttccaggcaataaaggaccacctggtttcccaggacaaccagga
agcaaagggattcgaggaccccaaggattcccaggactcccagggacacaaggcccaatg
ggaatctccggtgtaaaaggtgaagaaggaaaaatgggtccacctggacctagtggagaa
tgtggggatatgggattaaaaggtgaaagagggcctccaggagacagtggctgcattaac
atccgtcttgagaaaggacaaaaaggggaaccagggtttcctggtgagaatgggtttaga
ggtgaaagaggtgaaaaaggcaatactggtctcagaggcaccccaggatttccagggaag
aacggtgtcccaggactgccaggtgaccatggtgacattggactgatgggctttccagga
gcacagggtttcccaggaccaaggggctttaaaggaattatgggttttcaaggacaacca
ggtgaccagggtgatgttggcttatcaggaatccctggaaatccaggactgaccggccca
aaaggatctaaaggcaaaagaggtgacccaactcctctgcttggtacccagggtcgaaaa
gggcctcccggagatccaggattaccaggactctgtggattcccaggacagaagggttca
ccaggtatccaagggcaacctggaagaccaggatcgaagggtgaccctggatacccagga
atacctggatttccaggagctacaggtcctcagggcttgccaggagaacctggagaaaaa
gggaaacatggaattttgggacctccaggattgcaaggattacctgggtcgccaggcaga
aaaggtcttcctggaccacctggactggatggcttggatggactaaaaggtcaaaaaggt
tctgcaggagttccaggtcaaagtgaaacagggcccccaggatacccaggagaacttgga
ccaaaaggagacagaggtgaacctggatggcctggtatttctattccaggcccccctgga
gaaaggggattcccaggattcccaggtagaagaggacctgctggacccactggacctatg
ggaaagtgtccttatagtgcttctcctggtcctccaggtgatcaaggaccacctggttta
gatggcatcagaggtcagcctgggaatcctggtcctcctggagataccatctttgtgcga
ggagatccaggcgatattggtattcgaggggcaccaggtaaccctgggcagcgagggcaa
caaggagccagaggtcttccagggaaccaaggaagaagaggcccaaagggtcctatggga
atccatggcccacagggtccacctggtgctacaggacaaccaggagaccaaggttttcaa
ggaaaacctggtcccagaggtcctccaggtttcataggtgaccctggtgaaccaggaaaa
atagatgattcatgctctgcaatcccagggcctcctggggaagcagggcaaagaggacac
gatggccctgtaggattaccagggccaataggccaccctggaccccaaggaagaaaagga
gaagaagggtcatgtggcctgcgaggtcaagatggcttacctggggcacccggaccacca
ggtgaccaagggcatgtaggagagcaaggatatgctgggccacaaggtccacctggccag
actggtatcccaggaccaccgggcccccatattagatctgcaagtggattcctgcttgtt
cttcacagtcagtcagacagagaaccactctgtccacaggggatgccaaaattatggact
ggctacagtctgctgtacctggaaggacaagagaaagctcacaatcaggaccttggtctg
gcaggatcttgtcttcctgtgtttaataccatgccctttgcttactgtaacatcaaccaa
gtttgttactacgccagtcgaaatgataagtcttactggttgtcaagcgccgctcctcta
cccatgacaccactctcagaagaagaaatacaaccctacataagcaggtgtgccgtttgc
gaggccccagcccaagcggtggcagttcacagccaagatcagtcaattcccccctgccca
gtgaactggagaagtctttggatcggatattcttttttgatgcacactggatctggtgat
cagggtggtggacagtctcttatgtcacctggaagttgcctagaagacttcagatcagca
ccattcattgaatgccagggtcagcggggaacatgtcagttttttgctaatgaatacagt
ttctggctgacaacagtgatgcctgaattgcagtttgcatcagcccccatgtcaggaact
cttaaagaaggacaagagcagaggaaaaaaatcagtagatgccaggtatgcctgagacat
ggctaa
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