Numenius arquata (Eurasian curlew): 141468699
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Entry
141468699 CDS
T11436
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq04512
ECM-receptor interaction
narq04514
Cell adhesion molecule (CAM) interaction
narq04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141468699 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
141468699 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141468699 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
narq04131
]
141468699 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
narq04090
]
141468699 (SDC1)
00535 Proteoglycans [BR:
narq00535
]
141468699 (SDC1)
Membrane trafficking [BR:
narq04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
141468699 (SDC1)
CD molecules [BR:
narq04090
]
Proteins
141468699 (SDC1)
Proteoglycans [BR:
narq00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
141468699 (SDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
141468699
NCBI-ProteinID:
XP_074009955
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All DBs
Position
9:complement(51498268..51524087)
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AA seq
309 aa
AA seq
DB search
MINVVAVWLVALCFQAAVPQTTNLNLPPEDLDSSGDDDDAFSGSGAGPLTDQSHTWRIPG
ELTNSSLLVTPMDFNEQPFPGIESRTEKEVVSPSATSNVVTEEPVVAVKDEVPILGSPDE
KPTNDAVTTTVRSPTTRFPPVVHVTPSEASGMVHKLEPKIPSSDVPDTKDVPEPHSTIHR
EGDIAATPTTTAPKDVVPTHEEVSEDGSGDPGDFILTKDEDLVPTQNSEVPADSGRNAKA
AGASGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQK
PHKQEEFYA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgtggtggccgtgtggctggtggccctttgcttccaggctgctgtcccgcaa
actacaaatttgaaccttcctcctgaagatcttgattcatctggtgatgacgatgatgca
ttctcaggttcaggtgcaggtcccctgactgaccagtctcacacctggagaatcccagga
gaactgactaattcctcattgctggtaacaccaatggatttcaatgaacagccgtttccc
gggattgagagccgaactgaaaaggaagtagtatctccttctgccactagtaatgtagtg
acagaggagccagttgtagctgtgaaggatgaagtacccatcctgggctcacctgatgag
aaaccaacaaatgatgcagttacaacaacagtgagaagccccactactcgctttcctcca
gtggttcatgtaactccttcagaagcctcaggcatggtccataagcttgaacctaaaatc
cctagctctgatgtgcccgacactaaagacgtgcctgagcctcactctaccatccatcgt
gagggagacattgctgccacccccacgacgacggctccaaaggacgtggttcctacacat
gaggaggtttctgaagatggctctggagacccgggagacttcatcttgactaaagatgag
gatttggtccccacccagaactcagaagtgccagctgactctgggaggaatgccaaagca
gcaggagcctcgggaattatggacagaaaagaagttcttggaggtgttattgctggagga
ctagtaggcttggtgtttgcagtgtttctagttgcatttatgctatacagaatgaagaaa
aaagacgaaggcagctattcactggatgaaccaaaacagtctaacggaggataccaaaaa
ccacacaaacaagaagaattctatgcataa
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