Numenius arquata (Eurasian curlew): 141472069
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Entry
141472069 CDS
T11436
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
narq Numenius arquata (Eurasian curlew)
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
narq03009
]
141472069 (PDCD11)
Ribosome biogenesis [BR:
narq03009
]
Eukaryotic type
90S particles
Other 90S particles
141472069 (PDCD11)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141472069
NCBI-ProteinID:
XP_074014955
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Position
15:3707844..3735977
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AA seq
1837 aa
AA seq
DB search
MASMEENFPRGGIQKKPTEGKTSNPKVERDNLFDVHHEEQSQKRKRSRSDQGKQKKFKAD
RTAAAKDSIVNIEPLSIEAVCEGMLFLGCIKEVSDYELVVSLPNGLSGFVPVTQISDAYS
TLLSKQVAQGELLEDLNSLSDMYSPGTLVRCVVTSVEKSADGRRSIKLSIDPKKVNKGLN
ASALASGMLLSGFVSSVEDHGYLIDIGVRGTHAFLPRQKAQNYIKAVKRGSDLKIGQNLH
CVIVEVKNEGRVVRLSIDRSEVAASLATERQNWTLSNLLPGLVVKARVQKVAPLGIKVSF
LSSFTGVVDFMHMDPEKSMNYSPDQVMKACILSIHPTSKVVRLTLRQAFLHPGGSPNQLS
NDRMGAVVEESTVKVFYKQFGAIFELDDGTLGFARLKHLSKNRKSFKPGAFKTGCKHKCR
IIDYSLMDEMCIVSLKYQVIEARFLRYQDIHTGDVVQGKVFALKPIGMQVKVTDGIKGLV
PSLHLADVILKQPEKKYNIGDEIKCRVLECNPEGKKLILTLKKSLVQSKLPILSNYEDAK
PGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELSSEPISCPDKVFNEGQVVKVMVLKCE
PQQERLLLSFRLLSKPAQEDKKEGTPKKKQEVKYQIGEMVDVKVLKKKDNGLEVSVLEDE
GNVMAWIPTVHLSDFVVNCKLLWHCLQEGDVLPRVMCLSDKGERITLSRKSAVISAVQEE
QVVRSFSEIQPGMLLTGYVRNVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVVGQ
TVIAKVMSIDEEKQRVLLNLKVSECSSGDSAAESFALLNQYFKEMKEIRNLLKRRGGSST
AQGLWELVPGKELQLVVQDVKEDGSALFSGSCVTGLTVTATRYHLGDKNIVPGEKIKALV
LHVDALTSKVYVSLREELLKQRPKQRFTENSQHSAIVQLVAEEFAIVSLLETGQLAAVPI
ASHFNDTFRFDSEKLKVGQTISATLKVVKVNDNGVLLAVQGPAKKNVFVRVRKESETPLE
EMLAAVTHSLSLGDIVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDEVPIGSFPTYTLK
AGQKVTARVIGGREVNTHRYLPITHPHFTRSIPELSIRPSEIEGEVTAMINPKEDSALKK
LGLYDVGQTVTCFVKKYNVLKNWLEVEVTPDIRGRIPHLLLSLNTKVLKHPEKSFKNGQA
ISATVTGTDVTETNLCLSLTGIQLLEQGTIAIGMVTKVTPHMGLTIALPGGKTGRVNIFH
LNDTYTENPLGDFKVGKIVRCYILSNKKSRIQLSLRQSRLNPKSNSKVEDVEITSIKDLK
KGQLVRGYVKSITSSGVFFGLSASLLGRILFQNVSPYFVQNHSLYEKYLPEGKLLTAKVL
GVTGKHIELSLLPDDTGMPSVLPESLGLPRYDAEEEKREADDREKREELKMKTKRRRGNS
ESEQEVKPKKKKICPADENDSGIEVYYREEEEEDDQEEEAAKKKSKIKKPGEAPRLQVSM
GFTWDEDMNAMDMPVLNQKEESSESEEEEDPQSKQKKQTKKEKELEKQKKEKELCKLEAA
LMDPGRQPQSADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTICFREE
QEKLNVWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYANSEKYKQAEELY
HTMLKRFRQEKSVWLKYASFLLKQGQTEATHRLLERALKALPTKEHVDVISRFAQLEFRF
GDPEHAKALFESTLSSYPKRTDIWSIYMDIMIKQGSQKEVRDIFERVIHLSLAPKKMKFF
FKRYLDYEKKFGTSESVLAVKRAALEYVETKSSFADT
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatggaagaaaattttcctcgagggggcatccagaaaaaacccacagaggga
aaaacatccaacccgaaagtagagcgggacaatttgtttgatgttcaccatgaagaacaa
tcccagaaaagaaaaaggagccgaagtgatcaaggaaagcagaaaaagttcaaggcagac
agaacagccgctgctaaagacagcattgtgaatattgaaccactctcaatcgaggcggtc
tgtgaggggatgctgttccttggttgtataaaagaggtcagtgactacgagctagtcgtc
agcttgcccaacggactgtcaggatttgtgccggtcacgcagatcagtgatgcctacagc
acattgctgagcaagcaggtggcccaaggagaactcctggaggacttgaattcgctctcg
gacatgtattctccagggacactggtcaggtgcgttgtgaccagtgttgagaaaagtgct
gacggacgtcggagtatcaagttatcgatcgaccccaagaaggtcaataagggtctgaat
gcttcagcccttgcatctggcatgctgctctctggctttgtgtctagtgtggaagaccat
ggctacctcattgatattggagttagggggactcatgctttcctgcctcgtcagaaagcc
caaaattacatcaaagcagtcaagagagggtctgacttgaaaataggccagaacctgcac
tgtgtcattgtggaagtaaagaacgagggaagagtggtccgtttgtccattgatcgatca
gaggttgctgcatcccttgcaacagagcgacagaactggaccctctctaatttattacca
gggctggtggtgaaagctcgagtgcagaaggtagccccacttgggatcaaagtgagcttt
ctgtcttccttcactggcgttgtggatttcatgcacatggacccagaaaaatccatgaac
tattctccggatcaagtgatgaaagcttgcatcctctccatccaccccacctccaaggtg
gtgcgacttactctgcggcaggccttcctccaccccgggggatccccaaaccagctctcc
aatgatcgcatgggggcagtggtggaagagtcaacagtgaaagttttctacaagcagttt
ggtgccatctttgagcttgatgatggcactcttgggtttgcacggttgaaacatctttca
aaaaacagaaaatcttttaaacctggggcgtttaagacaggatgcaaacacaaatgtcgg
atcattgactacagcctgatggatgagatgtgtattgtatctctgaagtatcaggttatt
gaagcgcggtttctgcgataccaagatatccacacaggggatgtggtgcagggcaaagta
tttgcattgaaacccattgggatgcaggtgaaagtgactgatgggattaaagggcttgta
ccatccttgcatctcgctgatgtgatcctgaagcagcctgagaagaagtacaacatagga
gatgaaatcaagtgtcgggtactagagtgcaatcctgaaggaaagaagctgatccttact
ctaaagaaaagtcttgtccaatcaaagcttccaatcctctccaattatgaagatgcaaaa
ccagggctaatcacacatggctttgtggtgtgtgcgagggagtttggctgcattgtgaag
ttctacaatgatgtcaaaggtctggtacccaagaatgagctgagctcagaacccatatct
tgtccagataaagtcttcaatgaaggccaggtggtcaaagtaatggtcttaaaatgtgag
ccccagcaggaaagactcttgttgtccttcaggttattgagcaagcctgcccaggaggat
aaaaaggaagggactccaaagaagaaacaggaagtgaaatatcaaataggagagatggtt
gatgtgaaagtcttaaagaagaaagataacgggctagaggtttctgtcttagaagatgaa
ggcaatgtgatggcctggattcccacagtgcacctctctgactttgttgtgaactgcaag
cttctgtggcattgtcttcaagagggcgatgtcctgccaagagttatgtgcctaagtgac
aagggagagcgtatcaccttgagcagaaagtctgcagtgatttctgctgtacaggaggag
caagttgtgcgaagtttctctgaaatccagcctgggatgctattgactggttacgtgagg
aacgtgatgccttttggagtgtttgtggagttcccttttggtgtgacaggactggctccc
aaagtgagcatgagtgacaagtttgtgacggacaccaaggaccactttgtggtgggacag
accgtgattgcaaaggtgatgagcattgatgaggagaagcagcgtgtgctcctcaatctg
aaggtgtcagagtgcagctcaggcgattctgctgcagagagctttgccctgctgaatcaa
tatttcaaggagatgaaagaaatcaggaacttgttgaaaagaagaggggggtccagcaca
gcccaaggcctttgggagttggttcctgggaaggagctgcagctggtggtgcaggatgtg
aaggaggatggctcagcgctgttcagtggcagctgcgtcacaggcttgactgtaacagcc
actcgctaccacttgggagacaaaaatattgttcctggtgagaaaatcaaggcattggtt
cttcatgtggatgccctcacatccaaggtgtatgtttctcttcgggaagaactgttaaaa
caaagacctaagcagcggttcacagagaactcccagcactctgccatcgtgcagctcgta
gcagaagagtttgccatcgtgtctttgttggaaacaggccagctggcagctgtccccata
gcctctcacttcaatgacaccttccgctttgactcagaaaaactgaaggtgggacaaaca
atctctgcaaccttaaaagtggtgaaggtgaatgacaacggagtcttattagcagtacaa
ggcccagcaaagaagaatgtttttgtaagggtccggaaagaatctgagacaccattagaa
gagatgcttgctgctgtgacacactcgctttccctgggggacattgttactggtactgtt
aaatccgtcaaaccaacccatgtcacagttgctattgatgacaagctgacgggttcaatc
catgcatcccggattctggatgaagtgcccataggctcttttccaacatatactctgaaa
gctggacagaaggtgactgcccgagtcattggaggcagagaggtgaatactcacaggtac
ctgcccatcacccatccacacttcacacggtccattccagagctcagcattcgaccaagc
gaaatagaaggggaagtcacagcaatgataaaccctaaagaagacagtgccctcaagaaa
cttggactctacgatgttggacagacagtcacctgttttgtgaaaaagtataacgtcctc
aaaaattggctggaggtggaagtcacccctgacattcgaggaagaattcctcatctgctg
ctgtctctgaacaccaaggtcttaaaacatccggaaaagagcttcaaaaatggccaagca
atatcagctacagtgactggaacagatgtcaccgaaacaaacctctgcttgtcactcaca
ggaattcagttgctggagcagggcaccatcgccataggcatggtaacaaaggtgactcca
cacatgggtttgaccattgcgctgccaggtgggaagactggcagagtcaacatctttcac
ctgaatgatacttatacagagaatcctctaggtgacttcaaagttggcaagattgtcagg
tgctacatcctctccaataagaagagcagaatccagttatctctccggcaatcccggcta
aacccaaagagcaacagcaaagtagaggatgttgaaataacaagtattaaggatcttaaa
aaaggccagctagtgagaggctatgtcaaatcaatcacttcatcaggtgtattctttggc
ttgtctgcttctcttctgggccgaatcttgttccagaatgtttccccttactttgtacag
aaccactctttatatgaaaagtacctgccagaaggaaagctgctcactgccaaagtgctt
ggtgtaacaggaaaacacattgagctctccctcctacctgacgacaccggaatgccaagt
gtcttacctgaatccctaggcctaccacgatatgatgcagaggaagagaaaagagaggca
gatgacagggaaaagagagaagagcttaagatgaagacaaaacggagaagaggaaactct
gaaagtgagcaggaggtgaagccaaaaaaaaagaaaatctgcccagcagatgaaaatgac
agtggaattgaggtatattaccgggaagaggaggaggaggatgaccaggaggaagaggca
gctaaaaagaagtctaagataaagaaacctggtgaagctcccaggctgcaggtttccatg
ggtttcacctgggatgaggacatgaatgcaatggatatgcctgtgctgaatcagaaggaa
gagagctcagagagcgaggaggaggaggatccgcagtctaagcagaagaaacaaacaaag
aaggagaaggaactagagaagcagaaaaaggagaaggagctctgcaaattagaggcagct
ctcatggaccccggtcgacagccccagtcagcagatgactttgaccgcctggtgctgagc
agtcccaacagctccatcctctggctacagtacatggctttccacctccaggctactgag
attgagaaggccagagctgtggcagagagagcgcttaaaacaatctgcttcagggaagaa
caggagaagctgaatgtctgggtagctctgctgaacttggagaacatgtatggtactgag
gagacactgatgaaggtctttgagagagctgttcaatacaatgagcctctgaaagtcttc
cagcatctgtgtgacatctatgccaattctgagaagtacaagcaagcagaagaattgtac
cacacgatgctgaagcgtttccgtcaggagaaatctgtgtggctgaaatacgcctctttc
ctcctgaagcaaggccagactgaggctacacacaggcttttggagcgggctctcaaggct
ttgcctaccaaagaacatgtggatgtcatttcaaggtttgcacagctagagttccgtttt
ggggacccagaacatgccaaggccctcttcgagagcaccctcagcagctatcccaagcgg
acagacatctggtccatctacatggacatcatgatcaaacagggcagccagaaggaagtg
cgggacatcttcgagagggtcatacacctgagcttggcaccaaagaagatgaaattcttc
tttaaacgctacctggattatgagaagaaatttggtacatcagaaagtgtcctggctgtt
aaaagagcagcacttgagtatgtggagaccaagagttcctttgctgacacctaa
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