Numenius arquata (Eurasian curlew): 141472175
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Entry
141472175 CDS
T11436
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq04110
Cell cycle
narq04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
141472175 (SMC3)
04114 Oocyte meiosis
141472175 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
narq03036
]
141472175 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
narq00535
]
141472175 (SMC3)
Chromosome and associated proteins [BR:
narq03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
141472175 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
141472175 (SMC3)
Proteoglycans [BR:
narq00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
141472175 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
141472175
NCBI-ProteinID:
XP_074015126
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All DBs
Position
15:6508315..6535150
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaagcaggtaatcattcagggctttcgaagctacagggaccaaaccattgtg
gacccattcagctcaaaacacaatgtcattgtgggaagaaatggatctggaaaaagcaac
tttttctatgcaattcagtttgtcctcagtgatgagtttagtcatcttcgcccagagcag
agactggctttgttacatgaaggtacaggtcctcgcgttatttcagcatttgtggaaatt
atttttgacaattcggacaacaggttaccgattgataaagaggaagtctcacttcgcaga
gtcattggagccaagaaggaccaatatttcttagacaagaaaatggtgacgaaaaatgat
gtcatgaatcttctcgaaagtgctggattttctcgcagtaatccctactatattgtcaaa
caaggaaagatcaaccagatggccacagctcctgactctcaaagactgaagttactaaga
gaagtggctggtaccagagtgtatgatgaacgtaaagaagagagtatttcactgatgaaa
gaaacagagggcaagcgagagaagatcaatgagttgttgaaatacattgaagagcgactg
cataccctagaagaggagaaagaggagctggctcagtaccagaaatgggataaaatgagg
agagcattggaatacaccatttataatcaggagcttaatgaaacccgagctaagcttgat
gagctttctgccaaacgagagacaagtggagagaaatccaggcagctgagagatgcacag
caagatgctagagataaaatggaggaaatagaacggcaagttcgagaactgaagacaaag
atttcagcaatgaaagaagagaaagaacaacttagtgctgaaagacaggagcagattaaa
cagaggactaaattagagctgaaggctaaagacctgcaggatgaattagctggcaacagt
gaacaaaggaaaagactgttaaaagagaggcaaaagcttcttgagaaaattgaggagaag
cagaaagaattagcagaaacggagccgaaattcaacagtgttaaagaaaaagaagagagg
ggaattgctagacttgcacaggctacgcaggaaagaacagatctttatgcaaaacaaggt
cgaggaagccagtttacttccaaagaagaaagggataagtggataaagaaagaactgaaa
tctttagatcaagccatcaatgacaagaagcggcagattgcagctatacacaaggattta
gaggatacagaggccaacaaggagaaaaatttggaacagtacagtaaactggaccaagat
cttaatgaagtgaaggctcgtgttgaagaactggacagaaaatactatgaagtgaaaaat
aaaaaggatgaactacagagcgaaagaaattatctatggagagaagagaatgcagaacag
caagctcttgctgcgaagcgggaggatttggaaaagaaacagcagcttctcagagcagcg
acaggaaaggccattctgaatggtatagacagcataaacaaggttctggaacacttccgt
cgaaaaggcataaaccagcatgttctaaatggctatcatggcatcgtgatgaataacttt
gaatgcgaacccgctttctacacctgcgttgaagttactgcaggaaacaggttgttttat
cacattgtggattctgatgaggtcagtacaaagatcctaatggaatttaacaaaatgaac
cttcctggagaagttacgttcctccctctgaacaagctggatgttagagatactgcttat
cctgagactaacgacgctattcctatgatcagtaaactgagatacaatccaagatttgac
aaagctttcaaacatgtgtttggaaagactctaatttgtcgtagcatggaggtgtctact
cagctggccagagctttcactatggattgtattactctggaaggggatcaagtcagccat
cgcggtgctttgactggaggttattacgatacaaggaagtctcgtcttgaattgcaaaaa
gatgttagaaaggcagaagaagaacttggtgaactcgaagcaaaactcaatgaaaattta
cgcagaaacatcgaaaggattaataatgagatcgaccagctaatgaaccaaatgcagcaa
attgagacacaacagagaaagttcaaagcctcccgagacagtattttgtcagagatgaaa
atgctgaaggagaaaaggcagcagtctgaaaagacatttatgcctaagcaacgtagtttg
cagagcctggaggcaagtttacatgctatggagtcaacgagagaatcattaaaagcagaa
ctggggactgatttattgtctcagctcagtcttgaagatcagaaacgtgtggatgctctt
aatgatgaaattcgacaactacagcaagaaaacagacagcttttgaatgagaggattaaa
ctggaaggcattatcacaagagttgaaacgtatctcaatgagaatctgaggaaacgctta
gaccaagtggaacaagaactcaatgagcttcgagaaacagaaggtggcacagttcttact
gccacaacatcagaacttgaggctatcaacaaacgagtgaaagatacactggcacggtca
gatgatctggataactctattgacaaaactgaagcaggaattaaagagcttcaaaagagc
atggaacgctggaagaacatggagaaggagcatatggatgccattaaccacgatacaaaa
gaacttgaaaaaatgactaacaggcaaggcatgctcctcaagaagaaagaggaatgcatg
aagaaaatccgagagttgggttcacttccacaggaggcttttgaaaagtatcagacttta
agtttaaagcagttattccgcaaactagagcagtgcaatacagaactgaagaaatacagt
catgttaacaaaaaagccttagatcagtttgtgaatttctcggagcagaaggaaaaattg
ataaaaagacaagaggaactggacaggggctacaaatccatcatggaactgatgaatgtc
cttgagctcaggaaatacgaggctattcagctgactttcaaacaggtgtcaaaaaatttc
agcgaagtattccagaagttagtccctggtggcaaggccacgttagtgatgaagaaagga
gatgtggaaggcagtcagtcccaggatgaaggtgaaggtagcactgagagtgaaagggga
tctggatctcagagcagtgttccatctgtagaccagttcactggagttggcataagggta
tcattcacagggaagcagggtgaaatgagagaaatgcagcaactttcaggtggacagaaa
tccttagtggccctagccctgatctttgctatccagaaatgtgatccagctcctttttac
ttgtttgatgaaatcgaccaagccttggatgctcagcacagaaaagctgtgtcagatatg
attatggaactagcggaacatgctcagtttattacaactactttcaggcctgaactgctt
gagtccgctgacaaattctatggtgtaaaattcagaaacaaggttagtcatattgatgtg
atcacagcggaaatggccaaagactttgtagaagacgacaccacgcatggttaa
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