Numenius arquata (Eurasian curlew): 141473158
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Entry
141473158 CDS
T11436
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141473158 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
narq03041
]
141473158 (PRPF8)
Spliceosome [BR:
narq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
141473158 (PRPF8)
Complex C
U5 SnRNP specific factors
141473158 (PRPF8)
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SSDB
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Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
141473158
NCBI-ProteinID:
XP_074016606
LinkDB
All DBs
Position
18:complement(6935165..6954623)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAAVFPYRGGCAPVPTPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtcttcccgtaccgcggcggttgcgccccagtgccgaccccgctggcgccg
ctgcccgactacatgtctgaggagaagctgcaggagaaagcccgcaagtggcagcagctg
caggccaagcgctatgcggagaagaggaaattcggcttcgtggacgcgcagaaggaggac
atgccccccgagcatgtccggaagatcatccgtgaccacggtgacatgaccaataggaag
ttccgtcacgacaagcgtgtctacctgggcgctctgaagtacatgcctcatgctgttctg
aagctcttggagaacatgcccatgccctgggagcaaatcagagatgttccagtcttgtac
catatcacaggcgccatctcttttgtgaatgagattccctgggtcatagagccagtgtac
attgctcagtgggggtccatgtggattatgatgaggcgagagaagagggataggcgtcac
ttcaagaggatgagattccccccgtttgatgatgaagaaccccctctggattatgctgat
aacatcctggatgtggagcccctggaagcgattcagcttgagctggatccagaggaggat
gctcccgtcctggattggttctacgaccaccagccgctgaaagacaacaggaagtatgta
aatggttcaacgtaccagcgttggcagttcactctccccatgatgtccacgctgtaccgg
ctggccaaccagctgctcactgacctcgtggatgacaactatttctatttgtttgacctg
aaagcattctttacctccaaggcgctcaacatggctattcctggaggtcccaagtttgag
cctcttgtgagagacatcaatcttcaggatgaagactggaatgaatttaatgatatcaac
aaaattatcatcaggcagccgattaggacggagtacaaaattgctttcccttacctgtac
aataacctgccacaccatgtccacctgacctggtatcacactccaaatgtcgtcttcatt
aaaacagaagatcctgatctcccggctttttacttcgacccactgatcaaccccatttca
cacagacattctgtcaagagtcaggaaccattgcctgatgatgatgaagagtttgagttg
ccagaatttgtggaacctttcctgaaggataccccgctctacacagataacacagccaac
ggcattgcgctcctgtgggccccacggcccttcaacctgaggtctgggaggactcgaaga
gctcttgatatcccactggtcaagaactggtaccgtgagcactgcccagcaggccagcca
gtgaaagtacgggtttcctatcagaagctactgaaatactatgttctgaatgcgctcaag
cacagaccccccaaggcccagaagaagaggtacctgttccgatccttcaaggctacgaag
tttttccagtcaacgaagctggactgggtggaagttggcctgcaggtgtgtcgccagggc
tacaatatgctgaacttgctgatccacagaaagaacctgaactaccttcacttggattac
aatttcaacctgaagcccgtgaagactctcacgactaaggaaaggaaaaaatctcgtttc
ggtaatgctttccatctgtgccgagaggttctgcggctcactaagttggtggtggacagc
cacgtccaatacagacttggaaatgtggatgcatttcagttggcagatggcttgcagtac
atctttgcccatgtgggtcagctgacaggaatgtaccggtacaagtacaaactgatgagg
cagattcggatgtgcaaggacctgaaacatctaatctactacaggtttaacacagggcct
gtgggcaaaggtcctggctgtggcttctgggctccaggctggagagtatggctgttcttc
atgaggggcatcacgccactgctggaacgctggctggggaatctgctggccaggcagttt
gaaggccgtcactcaaagggtgtagcaaagactgtcacgaagcagcgtgtggagtctcac
tttgacctggagctgagggcagcagttatgcatgacattctggacatgatgccagaagga
atcaaacagaacaaagccagaaccatcctgcagcatctgagcgaggcctggcggtgctgg
aaggccaatattccctggaaggtgccagggctgccaactcctattgagaacatgatcctg
aggtatgtgaaggcaaaagctgactggtggacaaatacagctcactacaacagggagcgg
atccgtcggggtgccactgtggacaaaaccgtctgtaagaagaatctgggccggctgacc
aggctctacttaaaagctgagcaggaacggcagcataattacttgaaggatgggccttac
atcactgcggaagaggctgttgctgtgtacacaaccacagtgcactggctggagagcagg
aggttctcacccattcccttccccccgctgtcctacaagcatgacaccaagttgctcata
ttagccctggagaggctgaaggaggcttacagtgtgaaatctcgcctgaatcagtcgcag
agagaggagctgggcttgattgaacaggcttatgataatcctcatgaagctctgtccaga
atcaaacgacaccttttaactcagagagccttcaaggaggtgggaattgagttcatggat
ctctacagccacttagttcccgtttacgatgttgagcccttggagaaaatcacagatgcc
tatctggatcagtacttgtggtacgaggctgataagcgacgacttttccctccgtggatc
aaacctgctgacactgaacctcctccgctgttggtgtacaagtggtgccaaggcatcaat
aatctgcaagatgtttgggaaacaagtgaaggcgaatgcaatgtgatgctggaatctcga
tttgagaagatgtatgagaagattgacctgacgttgctcaacaggctgttgcgtcttatt
gttgatcacaacatcgctgactacatgacagccaagaacaacgtggtgatcaactacaag
gacatgaatcacacaaactcctatggcattattcgtgggctgcagtttgcttccttcatt
gtccagtattatgggcttgtgatggacctgctggtgctgggtctgcaccgtgccagtgaa
atggctgggcctccccagatgccaaatgacttcctcagcttccaagacattgccaccgag
gtggcccatcccattcgcctcttctgcagatacatcgaccgtatccacatcttcttcagg
tttacagcagatgaggcaagagacttgatccagcggtacctgacagagcatccagatccc
aacaatgagaacattgtaggctacaacaacaagaagtgctggccccgggatgctcggatg
cgcctcatgaaacatgatgtgaaccttggtcgtgctgtcttctgggatatcaagaaccgc
ttgcctcggtcagtcaccacagtgcagtgggagaacagcttcgtatcagtttacagcaag
gataaccccaatttgctgtttaacatgtgtggctttgagtgccgcatcttgcccaagtgc
cgcaccagctacgaggagttcacccacaaggacggtgtctggaacctgcagaacgaggtc
accaaggagcgcacagctcagtgcttcctgcgtgtggatgacgagtctatgcagagattt
cacaacagagtgaggcagatcctcatggcatctggctccacaaccttcactaagattgtc
aacaaatggaatacagctctgattggcttgatgacatatttccgggaagctgttgtaaac
actcaggagttgcttgatttgctggtgaagtgtgaaaataaaatccagactcgaatcaaa
attggtctgaattccaaaatgcccagtcgttttccaccggtggtgttttacaccccgaaa
gagctggggggtttgggcatgctctccatgggccacgttctcatcccacagtctgacctg
aggtggtctaagcagacagatgttggcatcactcacttccgctcaggaatgagtcacgag
gaggaccagctcataccaaatttgtatcgttacatccagccctgggagagtgaattcatt
gactctcagagagtgtgggcagagtatgccctcaagcgacaagaggccatagcccagaac
aggcgtctgactctggaggatctggaggactcgtgggacaggggaattcctcgtattaac
acccttttccagaaggaccgccataccttagcttatgataaagggtggagagtcaggact
gacttcaaacagtatcaggtcctgaaacagaacccgttctggtggacacatcagcgccat
gatgggaaactctggaacctgaacaactaccgcacagatatgatccaggcccttggtggg
gtggaagggatcctggagcacactctcttcaagggcacttacttccccacatgggagggt
ctcttctgggagaaggccagtggctttgaggagtccatgaagtggaagaagctgaccaat
gcccagagatcgggtttgaaccaaattccaaacagaagattcaccctgtggtggtctcct
accattaacagagccaacgtgtacgttgggtttcaggtgcagctggatttgacgggcatc
ttcatgcatggcaagatccccaccctgaagatttctctcattcagattttccgagctcac
ttgtggcaaaagatccatgagagcatcgtcatggatttgtgtcaggtgtttgatcaagag
ctggatgctctggagattgagacagtgcagaaagagacaatccatcccaggaagtcatac
aagatgaactcctcgtgtgcagatatccttctctttgcttcctataagtggaatgtgtca
cgtccatcattgcttgcagattccaaagatgtgatggacagcaccaccactcagaagtac
tggatagatatccagctgcgctggggagattacgattcccatgatatcgagcgctacgca
agagccaagttcctggactacactacggacaacatgagcatctacccatctcccactggg
gtgctcattgccatcgatctggcctataacttgcacagtgcttatgggaactggttccct
gggagcaaacctctgatccagcaggctatggccaaaattatgaaagcgaatcctgcgctg
tatgtgttgagagaacgaatccgcaaggggttgcagctgtactcatctgagcccacagaa
ccgtacctgtcctcccagaactacggagagctgttctccaaccaaatcatctggtttgtg
gatgacaccaatgtctacagagtgaccattcacaagacttttgaagggaatttgaccaca
aaacccatcaatggagccattttcatcttcaatcccaggactggacagctcttcctgaag
atcatccacacgtctgtgtgggcaggacagaagcgtctgggacagctggccaagtggaag
actgccgaagaagtggcagccttgattcgatcacttcctgtggaggagcagcccaagcag
atcatagtgacacggaagggcatgttggacccgcttgaggtgcacttgctggatttcccc
aatattgtgatcaaaggctcagagttgcagctgcccttccaggcctgtctgaaagtggaa
aagttcggtgatctcatcctgaaggctactgaaccccagatggttctcttcaatctctat
gatgactggttgaaaaccatctcttcctacacggcattctctcgtctgatcctgattctc
cgggcactgcatgtgaacaacgatcgagccaaagtcattctgaaaccggataagacaacc
ataacggagcctcaccacatctggccaaccctgacggatgaggagtggatcaaggtggag
gtgcagctgaaggatctcatccttgctgactatggcaagaagaacaacgtgaatgttgca
tccctgacacagtcagagatccgagacatcatcctgggcatggagatctctgccccctct
cagcagagacagcagattgcagaaattgagaagcaaaccaaggagcagtcgcagctgacg
gccacacagacccgcactgtcaacaaacacggggacgaaatcatcacctctacaaccagc
aactacgaaacccagactttctcctccaagacggagtggcgagtcagagcaatttctgct
gccaacctccacctgcgaacaaaccacatctatgtttcatcagatgatataaaggaaacg
ggttatacctacattcttcccaagaatgtgttgaagaaattcatctgcatctcggatctg
cgggcccagattgcaggttacctgtatggagtgagcccccccgataacccccaagtgaag
gagatccgatgcattgtgatggtgccccagtggggaacacaccagactgtgcatctcccg
gggcagctgccacagcacgaatatctcaaggaaatggaacctctggggtggattcacacc
caaccaaacgagtcccctcagctctcgccgcaggacgtcaccacccatgccaaggtcatg
gctgacaacccctcctgggatggggagaagactatcatcatcacctgcagctttacgccg
ggctcctgcacgctgacggcctacaaactgaccccgagcggctacgagtggggcaggcag
aacacggacaaagggaacaaccccaagggctacctgccatcccattacgagagggtgcag
atgctgctgtcggatcgtttcctcggcttcttcatggtcccagcacaagggtcctggaac
tacaacttcatgggtgttcgccacgaccccaacatgaagtacgagctgcagctcgccaac
cccaaggagttctaccacgaggtccatcgtccttctcacttcctcaacttcgccctgctg
caggagggggaggtctactccgccgaccgggaggacctttacgcctag
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