Numenius arquata (Eurasian curlew): 141473321
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Entry
141473321 CDS
T11436
Symbol
SMG8
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8
KO
K18734
protein SMG8
Organism
narq Numenius arquata (Eurasian curlew)
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
narq03019
]
141473321 (SMG8)
Messenger RNA biogenesis [BR:
narq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
141473321 (SMG8)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141473321
NCBI-ProteinID:
XP_074016856
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Position
18:9300514..9306670
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AA seq
992 aa
AA seq
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MRGAGAPPPLPGGRSGAGPGRAMPPPAGAMAAAVGPLSLREMLLAATAAAEGGGPAAGGD
EEVCVVGIFGKTALQLCSEKEALVSTVCDRQVFPLFGEEDPELTDGGPGQEGDPAAKDYN
QLQAYYSQESRVLYLVLTSICDTPQLLRACGDLAAAENRESGPGHPAGGPAPLPHAEAHE
FWKHQEKLHCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDGLRQKVLPSLKAAIKD
CPVGKEWKLNCRPCPPRLLFLFQLNGALKVDPLPSRGQDPCGHLEKPPPKKHSPKRRLQH
ALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVAGGPQDGDDPVAMLLDQLRSNCT
MRETDSLLAPTLSGPRRYQMMRHGRQQLSFHAESSSSSSSSSGQLVDCTLKEFLWQHVEL
VLSKKGFDDSVGRNPQPSHFELPTYQKWVAAALKLYEVTIEGKDDDPTSLTGELSSKIMG
SIKVLEGYLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHAR
GPAFHKYAMQLNEDCYKFWSNGHQLCEERSLTDQHCVHKFHLLPKAGEKPEADRNPPILY
HNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQMLEEKCCGKLEHINFPIFQPSTPDP
APARDESSPAPPEGEIEKLKEKEPQTQGESTGLSLALSLGQSTGSLGTYPPDAQGGGDNT
ESHGQSGDSKSEKRPSLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKAYNF
HTGLDQQGFIPGTNYLMPWDIVIKTRTEDEGDLDTNSWPAPNKAVPGKRSAVVMGRGRRR
DDIARAFVGFEYEDARGRRFMCSGPDKVMKVMGGGPKESAIKALNSDMPLYILSSTQGRG
LKPHYAQFMRLFVVVPDAPLQITLTPQVQPGPPPCPVFYPEKQEITLPSDGLWVLRFPYA
YVTERGPCFPPKESQQLMSYKVLRGILKAITQ
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggagccggggcgccgccgccgcttccgggcgggcggagcggggccgggccgggc
cgggccatgccgcctcccgccggggccatggcggccgcggtggggcccttgagcctgcgg
gagatgctgctagccgccacggccgccgccgaggggggcggcccggcggcgggcggcgat
gaggaggtgtgcgtggtgggcatcttcgggaagacggcgctgcagctgtgctcggagaag
gaggccctggtgagcaccgtgtgcgaccggcaggtctttcccctcttcggggaggaggac
cccgagctgacggacgggggcccggggcaggagggcgatccggcggccaaggactacaac
cagctgcaggcctactacagccaggagagccgggtgctgtacctggtgctcacctccatc
tgcgacacgccgcagctcctgcgggcctgcggggacctggcggcggccgagaacagggag
agcggccccggccaccccgccggtggcccggccccgctgccacacgccgaggcccacgag
ttctggaaacaccaggagaagctgcactgcctgagcctcctctacctcttctccgtctgc
cacatcctgctgctggtgcatcccacctgctccttcgacatcacctacgaccgcgtcttc
agggcgctggacgggctgcggcagaaggtcctgccctccctgaaggctgctatcaaagac
tgccccgttggcaaggagtggaagctcaactgcaggccatgccctccgcgtctcctcttc
ctcttccagctcaacggggccctgaaggtggatccccttccaagcaggggccaggacccc
tgtggtcacctcgaaaagcctccccccaagaagcactcccccaagaggcggttgcagcac
gctctggaggatcagatctaccgcatcttccgcaagagcagggtgctaaccaaccagagc
atcaactgcctgttcaccgtgcctgctaaccaggctttcgtgtacattgtggctggtggg
ccccaggacggagatgacccagtggccatgcttctcgaccaactcaggagcaactgcacc
atgagagagacagactcgctgttagctcccaccttgtcgggacccaggaggtatcagatg
atgcgacatggcaggcagcagctgtccttccatgcagagagcagcagcagcagctccagc
tcctccgggcagcttgtggactgcaccctcaaggaattcttgtggcagcacgtggagctg
gtgctcagcaagaagggcttcgatgatagtgtggggaggaacccgcagccctctcacttc
gagctcccaacctaccagaagtgggttgctgcagctttaaaactgtatgaagtgaccatc
gaaggcaaagacgatgacccgacctccctcactggggaactgagctcaaaaatcatgggt
agcatcaaagtcttggaaggctatttagatatagacaccaaattctctgaaaaccgttgc
cagaaagctctccccatggcccacagtgcctatcaatccaacctgccccacaattacacc
atgacggtccataagaaccagctggcacaggccttgcgtgtgtacagtcagcatgcccgc
ggcccggcctttcataagtacgccatgcagcttaacgaggactgctacaagttctggagc
aacgggcatcagctttgcgaagagcgaagtttaaccgaccagcactgcgtgcataaattt
catctgctcccaaaagcaggggagaagccggaagcagacagaaatcctccaattctgtac
cacaacagccgcgctcgttccactggtgcctgtaactgtgggaggaaacaagctcctcgg
gatgatccttttgatatcaaagcagctaactatgacttttaccagatgctggaagaaaaa
tgctgtgggaaactggagcacatcaacttccccatatttcagccgagcacacctgatccg
gcacctgctcgggatgagtcatcgcctgcccctccggaaggcgagatcgagaaacttaaa
gaaaaagaacctcagactcagggagaaagcacaggcctgagcttagccctcagcctgggg
cagtcaacgggcagcttgggcacttacccacctgacgcccagggtggaggggacaacaca
gaaagtcatgggcagagtggggactccaaaagtgagaaaaggccaagcctggtagatcgc
caggcttccactgtcgagtacctccctgggatgctccattctaattgccccaaaggcctt
ttgcccaaattctccagttggtcactggttaagctggggcctgctaaggcttataacttc
cacacaggcttagatcaacaaggctttatcccgggaacaaactatttaatgccttgggac
attgtcatcaagacgagaactgaagatgaaggagacttggataccaactcctggcctgca
ccgaacaaagctgttcctggaaaaagaagcgcggttgtgatgggaagaggaagacggaga
gatgatattgctcgagcttttgtaggatttgaatatgaagatgcacgtggtaggaggttc
atgtgttcagggcctgataaggtcatgaaggtgatgggaggagggccaaaggaatccgcc
atcaaagccctcaattctgacatgccgctgtacatcctgtcgtcgactcagggacgagga
ctcaagccacattacgctcagttcatgaggctctttgtggtggttcctgacgctccactg
cagatcacattaacgcctcaggttcaaccagggccaccaccttgtcctgtattttacccc
gagaagcaggaaataacccttccatccgatggactgtgggtgcttagatttccttacgcg
tacgtgacggagcgtggaccctgctttcctcccaaagaaagccaacaattaatgagttac
aaagttctccgaggaatactgaaagcaattacacaataa
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