Numenius arquata (Eurasian curlew): 141473579
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Entry
141473579 CDS
T11436
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141473579 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
narq03041
]
141473579 (PRPF4)
Spliceosome [BR:
narq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
141473579 (PRPF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
DSE1_N
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
ASA1
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD_LRWD1
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
141473579
NCBI-ProteinID:
XP_074017244
LinkDB
All DBs
Position
19:complement(1311338..1321011)
Genome browser
AA seq
536 aa
AA seq
DB search
MASVRAPAARGGARPPVRAPAPAEATKSKPAEEGDAPPPKRAPIFYGSLEEKERERLAKG
ESGLLGKEGMKAAIEAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTDDS
EVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQTW
YHEGPRSLKTARLWLANYSLPRAAKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNFCS
QIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHNTNVGAIVFHPKAT
ISLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVSRVMWHPSGRFLGTTCYDHS
WRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGH
LKEIYGVNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLL
TGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgtgcgggcaccggcggcgcgcggcggcgcccgcccccccgtgcgggccccc
gcacccgcggaggccacaaagagcaaacctgcagaggagggcgatgcgcctccacccaag
agagcccccatcttttatggcagtttggaagagaaggaaagggagcgtctggcaaaaggc
gaatcggggctgctgggaaaagaggggatgaaagctgcgattgaggctggcaacatcaac
ataagcagcggtgaggtctttgatctggaagaccacatgagcgagcggcaggcggaagtg
ctggctgagtttgagcgcaggaagagagcccggcagatcaacgtgtccaccgacgactca
gaagttaaagcctgtttgcgagcccttggggagcccataacgctctttggagaaggtcct
gcagaaaggagggagagattaagaaatatcctttcggtggttggcacagacgcattaaaa
aagaccaggaaagatgacgacaggtcaaaaaaatccaaagaagagtatcagcaaacctgg
taccacgaaggaccacgcagtctgaaaacagcgaggctgtggcttgcgaactactcgctc
cccagggcagcgaagcggctagaagaagcccggctgctcaaagagattccagaggccacc
aggacatcgcagagacaggagctacacaaatccctgcgatccttgaataacttctgcagt
cagattggagacgatcgcccgctgtcctactgccacttcagccccaactccaaactcctc
gctacggcctgttggagtggattgtgcaagctctggtccgtgcccgactgcaaccttgtc
cacaccttacgaggacataacaccaacgtcggagcaatagtcttccatcccaaagccact
atctccctggacaagaaggatgttaacctggcctcctgtgcggccgacgggtctgtcaaa
ctctggagcctcgaaagtgatgaaccagtggcagatattgaaggacacagcatgcgagtg
tcacgtgtgatgtggcacccgtctgggaggttcctgggcactacctgctacgatcactcg
tggcgcttgtgggacttggaagctcaggaagagattctccatcaggaggggcacagcaaa
ggggtctatgacattgccttccacacagacgggtctctcgctggcacgggagggctggat
gctttcggccgggtgtgggacttgcgcacaggacgctgcatcatgtttctagaaggccac
ctgaaggagatctacggggttaacttctccccaaacgggtaccacgtggcgactggcagt
ggtgacaacacttgcaaggtgtgggacctccgccagaggaagtgcatctacaccatccct
gcccatcagaacctggtgactggggtcaaatttgaacccaatcacggcaacttcctgctc
acgggtgcttacgacaacacagcaaagatctggactcaccccggctggtctccgctgaag
acgctggctggtcacgagggcaaggtgatgggactggacatctccctggacggccagctc
atcgccacctgctcctacgacagaaccttcaagctgtggacagcggagtag
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