Numenius arquata (Eurasian curlew): 141474211
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Entry
141474211 CDS
T11436
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq03013
Nucleocytoplasmic transport
narq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141474211 (SRRM1)
03015 mRNA surveillance pathway
141474211 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
narq03019
]
141474211 (SRRM1)
03041 Spliceosome [BR:
narq03041
]
141474211 (SRRM1)
Messenger RNA biogenesis [BR:
narq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
141474211 (SRRM1)
Spliceosome [BR:
narq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
141474211 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
141474211
NCBI-ProteinID:
XP_074018111
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All DBs
Position
21:complement(4983900..5004482)
Genome browser
AA seq
893 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNS
DIPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSS
SSSSSSRSRSPPKKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQ
QSNRSRKSRGSVSPSRSSAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKES
SPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQR
RYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRK
GSPPSRSNRETRSPPQNKRHSPSPRPRASHTSASPPPPRRGASASPQRRQSPSPSTRPIR
RVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPTRSRSPSANWSPA
KKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAAAAAAVA
AADTTSTQEDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggttcttccgcggaacaagtgcagaacaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaaatttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctgttaagtgcacaggaaaacattgctggtattcca
actgcatttctggaactgaagaaagaagaaataaaacagcgacagatagagcaagagaaa
ctggcttctatgaagaaacaagatgaagacaaggagaagagggataaggaagacaaagac
aacagagaaaaaagagacagatctaggagtccgagaagacgcaaatcaaggtctccttcc
cctcgaaggaggtcgtcgccggtcagaagagagcggaaacgcagtcattctcgttcccct
catcaccgaaccaagagccgtagtgctacccccgctccagaaaagaaagaggcgactcct
gagccagaaccctctgtgaaaccaaaggagactgttgttcaagaggcaacttcaaacagt
gatatcccaaaagctcctaaacctgaacctcctgtaccagagactaaggaaacttcacca
gaacgtaattcaaagaaggagagagagaaggagaaagagaagactcgtcaaagatcccca
actcggtctaagtcaaggtcaagatctcgatcacgttctccatctcattctcgaccaaga
aggcgtcatagatcacggtcaaggtcttactcccctagaaggcgaccaagccccaggcga
cggccgtctccaaggagaaggagccctccaaggcgaatgcctcccccacccagacacaga
agaagcagatcccctgtgaggcggagaagacggtcatcagcatccttatctggcagtagc
tcttcctcctcctcctcacgttcccgatcaccaccaaagaaaccacctaaaagaactgta
tccagtcctcctcgaaaaacgcgtaggctctctccttcggccagccctcctcgacggagg
catagaccatccccaccagcaagtccacctccaaaaccacgtaggtctccaacaccccag
cagtcgaatcgttcaagaaaaagccgcggctctgtttcgcctagcagatcatcagcaccc
aaacataagagtacggaaaaaagagaatctccttcgccagcaccaaaaccaaggaaagca
gaactgtctgaatcagaagaagacaaaggcggtaaaatggcagcagcagactctgttcag
cagaggcgtcagtacaggaggcaaaatcaacagtcttcatctgattctggttcttcatct
tcatctgaagaggaaagacctaaaagatccaatgtgaagaacggggaagttggtagacgc
cgacgccattcacattcacgcagcccctcaccgtctccacgaaaacgacagaaggaatcc
tcccctcgtcggaggaggaggagtccatcgcccccaccagcccggcggcgacgctctcct
tcacccgccccccctcccaggaggcggcgctcaccctcgttacctcgtcgaaggtctcca
tcaccacccccacgcagacgctcaccttctccgcggagatactctccaccgatacagaga
cgatactctccttctccaccaccgaagagaagaacggcttctcctcctccaccacctaaa
cgaagggcatcaccttctccacagtcaaaacgcagagtctcccattcgccaccgccaaaa
cagcggagctcgccagctgctaaacggcgttccccttccatatcttccaagcacaggaag
ggatctcctcccagtaggtccaaccgggaaacacgttctccaccacaaaacaaaaggcat
tcaccttcaccacggcctagagcttctcatacctctgcgagcccaccaccaccacggagg
ggagcttcagcatcaccccagagaagacagtcaccatctccaagcactagacccatcagg
agggtgtcaagaacgccagaacctaagaagacaaaggcttccacgccaagtccgcgatcg
gcgagacgggtgtcttcatcacggtctgcatcaggatcacctgaaccagccccgaaaaaa
catcaagggcctccatctcctactcggtcccgttccccttctgccaactggtcacctgca
aaaaaggctaaaagcccaactcagagcccttcacctgcaaggaattcagatcaagaaggg
ggtggaaagaagaagaagaaaaagaaggataagaagcataaaaaggataaaaagcacaag
aaacacaaaaagcataagaaggagaaggcggcagcggctgcagctgctgctgctgtggct
gcagctgataccacctcaacacaggaagaccaggaagcggagacagaacccaaaaaggag
acagaaagcgaaccagaagacaaccttgatgatctagaaaaacacctgcgagagaaggca
ctgaggtcgatgaggaaggcgcaagtgtcaccaccatcctag
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