Numenius arquata (Eurasian curlew): 141474362
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Entry
141474362 CDS
T11436
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4
KO
K13126
polyadenylate-binding protein
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq03015
mRNA surveillance pathway
narq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141474362 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
141474362 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
narq03019
]
141474362 (PABPC4)
03041 Spliceosome [BR:
narq03041
]
141474362 (PABPC4)
Messenger RNA biogenesis [BR:
narq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
141474362 (PABPC4)
mRNA cycle factors
Stress granule specific factors
141474362 (PABPC4)
Spliceosome [BR:
narq03041
]
Complex C
Other components
Complex C specific factors
141474362 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
Motif
Other DBs
NCBI-GeneID:
141474362
NCBI-ProteinID:
XP_074018332
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All DBs
Position
21:5462499..5477014
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AA seq
630 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEK
HEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQSRP
TYYAPNQMAQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLAPAGNAPASRGLPAA
AQRVGVGTAAQTLAPRPPVAAPAPRAVPPYKYASSVRSPHPAVQPLQAPQPAVHVQGQEP
LTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLR
SKVEEAVAVLQAHQAKKEAAQKVGVVAATS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggctgccagcagttaccccatggcgtccctctacgtgggcgacctgcacccc
gatgtcaccgaggccatgctctacgagaagttcagccccgccgggcctgtcctctccatt
cgggtctgcagggatatgatcacccgccggtccctggggtacgcctacgtcaacttccag
cagccggcagatgctgagcgtgctctagataccatgaattttgatgtgatcaaaggaaaa
cccattcgcatcatgtggtctcagagggacccctccttgaggaagtcaggggttgggaat
gtcttcattaagaacctggacaaatccattgataacaaggcactttatgacacattctca
gcgttcgggaatattttgtcctgcaaggtggtgtgtgacgagaatggctctaagggctac
gcatttgtgcactttgagacccaggatgctgcagatagagccatcgagaagatgaacggc
atgctgctaaacgaccgcaaagtatttgttgggagattcaagtctcgtaaagagcgggaa
gctgaattgggagccaaggcaaaggaattcaccaatgtttatattaaaaactttggggat
gacatggatgatgaaagactaaaggagctcttcagcaaatatggtaaaactctgagtgtt
aaagtgatgacagaccccactggaaaatccaaaggctttggctttgtaagctttgaaaag
catgaagatgctaacaaggcggtagaagaaatgaacgggaaggatatcaatgggaagatg
gtgtttgttggccgagcacagaagaaggtcgagcgccaggcagagctgaaacggaaattt
gagcagctaaaacaggagaggctcagccggtaccagggtgttaacctatacattaaaaac
ctagatgacactatagatgatgaaaaactgaggaaggagttctcaccttttgggtcaata
acaagtgccaaggtgatgctggaagatggacggagcaaaggatttggctttgtctgcttt
tcctctccagaggaagccacgaaagcggtgacagagatgaatgggcgaattgtgggctca
aagccgttgtacgttgcgcttgcccaaaggaaagaagagcggaaggcccatctaaccaat
cagtacatgcagcgcattgctgggatgagagccttgcctgccaacacaatcattaatcag
ttccagcctgctgctgggggatatttcatgcctgctgtgccccaggctcagagcagaccc
acttactatgcacccaaccaaatggcacagatgagacccaacccacgctggcagcaagga
ggaagacctcaaggcttccaaggaatgccaaatgccatgcgccagtctggaccacggcca
gcactgcgccatctggcccctgccggcaatgctccggcctcccgtggcctccctgccgct
gcccagcgagttggcgttggcaccgcggcgcagactttagctcctcgtccgcctgtagct
gcccccgctcccagagcagttcctccttacaaatacgcctcaagtgtccgcagccctcac
cctgcggtgcagcctttgcaggcgccccagcctgcggtacacgtgcagggacaggaaccg
ctgacagcctctatgctggctgctgcccctccccaggagcagaaacagatgctgggagaa
cgtttgttccctctgatccaagccatgcaccccagccttgcagggaagatcacaggaatg
ctgctagagattgacaactcggagctgctgcacatgctggagtctccagagtccctccgg
tcgaaggtggaggaggccgtggcggtgttacaggctcaccaagccaagaaagaagctgcc
cagaaggtgggcgtagttgctgctacctcttaa
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