KEGG   Numenius arquata (Eurasian curlew): 141475546
Entry
141475546         CDS       T11436                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
narq  Numenius arquata (Eurasian curlew)
Brite
KEGG Orthology (KO) [BR:narq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:narq03036]
    141475546 (KDM4B)
Enzymes [BR:narq01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     141475546 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     141475546 (KDM4B)
Chromosome and associated proteins [BR:narq03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    141475546 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141
Other DBs
NCBI-GeneID: 141475546
NCBI-ProteinID: XP_074020063
LinkDB
Position
25:3471535..3552828
AA seq 1111 aa
MGSEQNPGCKIMTFRPTLEEFRDFGKYIAYMESQGAHRAGLAKVIPPKEWKPRKTYDDID
DMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLERKYWK
NLTFVSPIYGADISGSLYDADVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFGMWKT
TFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLRHKMT
LISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKMA
TQCTCRKDMVKISMDVFVRVLQPERYDLWKQGKDNTVLDHMKPTALTSPELDAWNETKAE
LKAKLLRRIGDEEEDNKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVKVKEELKRG
ADLEEEERSKGIEGEGDCKVKARPPKVKGERKKKHLFHQHQHHLQAPQPPLPQQPLLPPP
PPPQQPLAEDEAPTARPPVPPAGPTSSTAEKSLPPAPLNIIQPSEAPVEEEDFKPRPIIP
MLYVVPRTKKVVFDKERMSCQQAFEQFATQKSPSWQEETVPMEISVKEEENAEAENTELA
AEVSDLQTASAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQETSSDEETFPFSGEEDMSD
PEALKSLLSLQWKNKAHNFPAERKFNAAAALSEPYCAVCTLFYPYNQSLQMDKEAVPVSV
GETTSFVHLSKCGQKTKPLIPEMCFTSSGENTEPLPSNSYIGEDGTSPLISCAKCCLQVH
ASCYGIRPDLVNESWSCSRCSANAWAAECCLCNLRGGALQMTTDGRWIHIICAIAVPEAR
FLNVIERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHVTCAHAAGV
PMEPDDWPYVVSITCFKHKAANQNIPFRREVTLGQTVITKNRNGLYYRCKVIGMTTQTFY
EVNFDDGSYSDNVYPESIISRDCIQMGPPPEGELVQLQWTDGIVYKAKFIAAQISQIYQV
EFEDGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEDVFSGDEVRPAKRPRLGNSRN
PEEYGQNPDYLAFMESLLQTQYQPGTQSNMF
NT seq 3336 nt   +upstreamnt  +downstreamnt
atggggtcggagcagaaccctggctgtaagatcatgacctttcgtcccacccttgaggag
tttcgggactttgggaagtacatcgcttatatggaatcacaaggagctcaccgagcaggg
ctggccaaggtgattcctcctaaggagtggaagccccgaaaaacctacgatgacatagat
gacatggttatcccagctcccatccagcaagtggttactgggcagtcggggttattcact
cagtataatatacagaagaaacccatgactgtgggagaataccggcgcctggctaacagc
gagaagtattgtactccgcgccatcaagattttgaagacttggagcgcaagtactggaag
aatctcacgtttgtctcgccaatttacggggctgatatcagtggctcactgtatgatgca
gacgtggaagaatggaacattggcaacctgaacaccctcttggacatggtggaacacgag
tgtggcattatcatagaaggcgtgaacactccctacctctactttgggatgtggaagaca
acgtttgcttggcacacagaggacatggatctctacagtatcaactacctgcattttggg
gagccaaaatcctggtacgccatacctccggaacacggcaagaggctggaacgcctggcg
aaaggattttttccaggaagctctcagggatgtgatgcttttctccgtcacaagatgacc
ctcatttcgccctcaatcctgaagaagtacggcattcctttcgaccggatcacccaggaa
gctggagagttcatgatcacgtttccttacggttaccatgccggcttcaaccatggcttc
aactgtgctgagtctaccaactttgccactttgcggtggattgactatggaaaaatggca
acccagtgtacttgccgcaaggacatggtgaagatttccatggatgtctttgtgagggtt
ctgcaaccagaacgttacgatttatggaaacaaggaaaagacaatactgtcctggaccac
atgaaacctacagccctgactagtccagaactagatgcctggaatgagaccaaggcagag
ttgaaggctaaattgcttcgcaggataggagatgaggaagaggacaacaaacaccggtct
cacagaaaaaggagtcagcccagaagacataaaacggaggatcagaagtctctcggggac
gtcatggctatcgaaactgccttggaagatgtgaaagtaaaagaggagctgaaaagaggg
gcagatctggaggaagaggagagaagcaaagggattgagggagaaggtgactgcaaagta
aaggcccgtcctccgaaagtcaaaggcgagaggaagaagaagcacctcttccatcaacac
cagcaccatctgcaagctcctcagcctcctctgccacaacagccactgctgccaccgccg
ccaccaccccagcagccgctggcagaggacgaggcaccaacagcacggccaccagtaccc
ccagcaggtcccacatcctccacggcagaaaagagcttgcccccagctcccctgaacatt
atccagccctcggaggcaccggtggaggaagaggacttcaaacctcggcccatcattccc
atgctttacgtggttccacggaccaaaaaggtggtgtttgacaaggagcgcatgtcctgc
cagcaggcgtttgagcagttcgccacccagaagagtccgagctggcaggaggagacggtc
cctatggaaatctccgtgaaggaggaggaaaacgcagaagcagaaaacacagagctcgct
gcagaggtcagtgatttacagactgcttctgctttttcaaaaatgaagatggagataaaa
aagagtcgtcgtcacccactgggcaaacccccaacgcgctccccgttgtcagtggttaaa
caggagacctcgagcgacgaggaaacatttccattttctggggaggaagatatgagcgac
ccggaggctttgaaatctttactttccctccagtggaagaataaagcccataatttccca
gctgaaagaaaattcaacgcagctgctgccctgagtgagccatactgtgctgtctgcacc
ctcttctacccctacaaccagtccttacagatggataaggaagctgtcccagtctctgtt
ggggagaccacctctttcgtccacctttcgaagtgcggacaaaagaccaagcctctcatc
ccggagatgtgctttacctcgagcggcgaaaacacggagccccttccttcaaattcctat
attggagaggatggaaccagtcccttgatatcctgtgccaaatgctgcctgcaggttcat
gctagctgttacggaatacgtccagatttggtgaatgaaagctggtcttgctcccggtgc
tcggccaatgcgtgggcagcggaatgttgcctctgtaatctcaggggaggagcccttcag
atgaccactgatgggcggtggatccatataatctgtgctattgctgtacccgaggcccgt
tttctcaatgtaatagagcgtcatcctgtggatatcagcgctattccggagcagagatgg
aaactgaaatgtgtgtactgccggaagcggatgaagaaggtgtccggcgcctgcatccag
tgctcctacgagcactgctccacctccttccacgtcacctgcgcgcacgcagccggcgtc
cccatggagcccgacgactggccctatgtcgtgtccatcacttgcttcaaacacaaagca
gccaaccagaatattccgtttcgaagggaggtgactctcggacagactgtgatcacgaag
aaccggaatggactctactacagatgtaaagtcatcggcatgacaacgcagaccttctac
gaagtaaactttgacgatggttcatacagtgacaacgtttacccagaaagcattattagc
agagactgcatccagatgggaccccctccggagggcgagttggtgcagctgcagtggacg
gacggaatcgtctataaggccaagtttattgcagcccagatcagtcagatttaccaggtc
gagtttgaagatggttcccagctgatggtaaagcgtggggatatttataccttggaggaa
gagcttcccaagagagtgaagtctcgcctgtccctcagcactggggcccctcaggaagat
gtattttcgggagatgaggtgagaccagccaagcgcccccggctggggaattcaagaaat
cctgaagaatacggacaaaacccagattacttggcctttatggagagcctgttgcagaca
cagtaccagcctggaactcagagcaacatgttttaa

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