Numenius arquata (Eurasian curlew): 141475782
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Entry
141475782 CDS
T11436
Symbol
USP39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141475782 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
narq03041
]
141475782 (USP39)
Spliceosome [BR:
narq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
141475782 (USP39)
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Ortholog
Paralog
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Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
141475782
NCBI-ProteinID:
XP_074020390
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All DBs
Position
26:complement(5900859..5905027)
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AA seq
592 aa
AA seq
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MSSRGKREREARAAPRGSGGGSSSSSSSSSRGSSRSRREGEGEAERSRGRREAERERGRR
EAAEPGLALPLPVDPARIKREPGTGSWGGSTTSAGPVRVKREREPDGDSDPEPEPTVRYG
RFDPEDQRSRHCPYLDTINKSVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAY
IHSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTAQQITNLDKQAKLSR
AYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEENYKSIQRPPGDIMFLL
VQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHSA
LGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKAQLLQNSEYQEMMVESTFMYLTL
DLPTAPLYKDEKEQLIIPQVPLFSILAKFNGATEKEYKTYKENFLKRFQLTRLPPYLIFC
IKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAAHTNTTYDLIANIVHDGKPSEGS
YRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRREEDETNQQGA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccgtgggaagcgggagcgggaggcccgggcggccccgcggggctctggcggc
ggctcctcctcctcctcctcatcgtcatcacggggctcgtcgcggagccgccgggagggg
gagggggaggcggagcggtcgcggggacggcgggaggcggagcgggagcgcgggcggcgg
gaggcggcggagccggggctggccctgccgctgccggtggatcccgcacgcatcaagcgg
gagccgggcaccggctcctgggggggttccaccacctctgccggcccggtgcgggtcaag
cgggagcgggagcctgatggcgactcggatcctgagcccgagcccaccgtgcgctatggc
cgtttcgaccccgaagaccagcgcagccggcactgcccctacctggacaccatcaacaag
agcgtcctggattttgatttcgagaagctctgctccatctcgctgtcccacatcaacgtc
tatgcctgcctcgtctgcgggaagtacttccagggccgtgggctgaagtctcacgcctac
atccacagcgtccagttcagccaccacgtctttctcaacctccacaccctcaagttttac
tgcctccctgacaactatgagatcatcgactcctcgctggaggacatcacgtacgtgctg
aagcccaccttcactgcgcagcagatcaccaacctggacaagcaggccaagctctcccgt
gcctacgatggcaccacgtacctgcccggcattgtggggctcaacaacatcaaagccaat
gactacgccaacgccgtcctccaggctttatccaacgtcccgccattgaggaattatttt
ttggaggaggagaactacaagagcatccagcgcccgccgggggacatcatgttcctgctg
gtgcagcgctttggggagctgatgcggaagctgtggaacccccggaacttcaaagcacac
gtctcaccccacgagatgctgcaggccgtggtcctctgcagcaagaagaacttccagatc
accaagcaaggggacggggtggacttcctctcctggttcctgaacgcactgcactcagcg
ctgggcggcaccaagaagaagaagaagaccatcgtcactgacgtcttccagggctccatg
cgcatcttcaccaaaaagctgcctcacccggacctgccggctgaggagaaggcgcagctc
ctgcagaacagcgagtaccaggagatgatggtggaatccaccttcatgtacttgacgttg
gaccttcccaccgccccgctctacaaggacgagaaggagcagctcatcatcccccaggtc
cccctcttcagcatcttggccaaattcaacggcgccactgagaaggagtacaaaacctac
aaggagaacttcctcaagcgtttccaactcaccaggctgcctccctacctcatcttctgc
atcaagcgcttcaccaagaacaacttctttgtggagaagaaccccaccatcgtcaacttc
cccatcacgaacgtggacctgcgggagtacctgtcggaggaggtgcaggcagcgcacacc
aacaccacctacgaccttatcgccaacatcgtgcatgacgggaaaccctccgaaggctct
taccgcatccacgtgctgcaccacggcactggaaagtggtacgagctgcaggacctgcag
gtgaccgacatcttgccgcagatgatcaccctctcggaggcatacatccagatctggaag
cggcgcgaggaggatgagacgaaccaacaaggcgcctga
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