Numenius arquata (Eurasian curlew): 141476974
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Entry
141476974 CDS
T11436
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141476974 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
narq03019
]
141476974 (SKIC3)
Messenger RNA biogenesis [BR:
narq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
141476974 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_11
TPR_12
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_9
ANAPC3
ARM_TT21_C
TPR-S
TPR_15
HAT_PRP39_N
TPR_30
BTAD
TPR_20
ARM_TT21
TPR_5
HAT_Syf1_M
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
141476974
NCBI-ProteinID:
XP_074022062
LinkDB
All DBs
Position
Z:complement(84417825..84475240)
Genome browser
AA seq
1561 aa
AA seq
DB search
MSNKEVKAALKSAREAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKPNQTDVRGDLAEVYQKLLQLYESGDKQKWCDVCN
KLVELYHQEKKYSEVAETWQKLIQVKQEEGAEKAELHQLWKKMIQLLKDSTENQDNKTEQ
SLLTAFEHAVNSADTVPSEDHQKLYKDFIQCLSKFPHETARLEKACRDMMALYPTVCYPL
EVLCLHFVQSGTLSEEALDCFSRLLEMDASSGPGIIGLGIKCLQEKKYKEAVKSLTEGLQ
KTSQCPAAWHYLAEAQTKIHKHRDAVLSCNKALQALGTPEGPNLQWKNRILQLKAEALIK
IADADAAEEAIQSLEQIVDASSDPVVLALRGRAYLSKGLMDQASKISQELLSSHPDLAEP
HALEGFIHYSQKNYEQAERSFLNAIERKAETAEYHQYLGLTYWFMSDETKKDKGKALTQF
LKAAKLDNYLGSVFCYLGNYYRDIAGDKSRARGCYKKAFELDGTDEESGTAAVDLSVELG
DMDTALSILNEVTEKASTGTAKWAWLHRGLYYLSTDKPSQAVADLQAAVRADPKDSNCWE
SLGEAYLSRGSYSTALKSFRKASELNPGLVYSIYKTAAVEQILGKYENAISTYQQILKTE
DYVPALKGLGECYLMLARSALDNYFDRKAMDYIEQALEFFTRATKLRPDVSCLWKLLGDT
CTSVHVISPSKVNIQVLGSLLGKNTGKETLKKSELLRLGGRCYGRALKLMPLASIWCDLG
INYYRQAEDLRAVGSDMNEISELLEKSLQCLKKAVRLDSKNHLCWNALGVVASCSAIGNY
ALAQHSFIKSVQAEQINVVAWTNLGVLYLSTGNIEQAHEAFKIAQSLEPSYLLCWIGQAL
IAENIGSYDTMDLFRHTTELSMHNEGAKGYAHWVCSTLQDKSNRNTELYLYNIVQMNAIP
AAQVVLSKYTERNPDDASAFSMLGYLNECLDLKRQAADAYGRAASLLKNSEDTEQYNMAM
QNYGRTLCAIGQCDKAIEVYTSMSLSEFDGIVGIALAYFKKGLLEESMKAYEKALSVAES
EQDKAHILTALAIIEYKQNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKRDATLATAA
LKELLKHEKGDDGIYERCLIASAVYALQGRNVQVQREVSKAIHSYPGNPALWSLLSRVVP
LYASQKAKGGAVAGDVAHVLDVNRGKEVLLNIAVNQLAAGCHMLEDEKNNPLKNIQKAIH
LCPDNPVAWAVLMAACHAENTVVCLNNTQPKRTDLEMTLVSTVSAKTGENNLPHNYIRTL
EDWCLCQAITSLEETGKLSEAEALCTKGLKSCPEHPALFLLLRQIQCKQLLQTHKELPDN
VLEELRKTVMASSTSVTAWQWLAKVYQSQRMMVGAEMCYRKSLQLASQQGSWSGKLSSLL
GLAMLALEACKANVSNEHWPSLVQEATTEALKLSPCPLATLLQALLQYNRKMGARETRRM
LERVVYQPGNPETIASVARWYLLQHLHAKDDHELIEVLIENAKANGDARALELHEKLSAS
A
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaagcagctttaaagagtgctagagaagcaatacgaaataaa
gaatataaggaagccttaaaacattgcaaggcagttttgaagcaagaaaaaaataactac
aatgcttgggtattcattggcctggcagctgccgagttggagcagcctgatcaggccaaa
ggagcatacaaaaaggctattgaacttgaaccaaaccagttactggcatggcagggatta
gcaaatttatatgagaaacccaaccaaacagatgtcagaggagacttagcagaggtttac
caaaagctcttgcagctctatgaaagtggtgacaagcagaaatggtgtgatgtatgtaac
aagcttgtggaactgtatcatcaagaaaagaaatattcagaggtggctgaaacatggcag
aagctcatacaagtgaaacaggaggaaggggcagaaaaggcagagcttcaccagctttgg
aagaagatgatccagttactgaaggacagcacagagaaccaggataataagacagagcag
tcgcttttgactgcatttgagcatgcggtgaactctgctgacaccgttcccagtgaagac
caccaaaaactttacaaggactttattcagtgcttgtcaaaatttcctcatgaaacagct
aggttggaaaaggcctgtcgtgatatgatggctttgtatcctactgtgtgttatccttta
gaagtactttgcttgcactttgttcagtcaggtactttgtcagaagaggccctggactgt
ttctctaggcttttggagatggatgctagtagtggtccaggcatcatcggtttgggtata
aaatgcctccaagaaaagaagtacaaggaggctgttaagagtcttactgaaggtttgcag
aagactagccagtgtccggcagcatggcattatttggctgaggcacagacgaaaattcac
aaacaccgggatgctgtcctgtcctgcaataaagctcttcaggctcttggaactcctgag
ggtcctaatctacagtggaagaaccgtatccttcagctgaaagcagaggctttgattaaa
attgctgatgctgatgctgcagaagaagccattcaatcacttgagcagatcgtggatgca
agcagtgatccagtggttttagctctcagaggtcgggcttatctaagcaaagggttaatg
gatcaggcttcaaagatttcacaagagcttctgtcatcccacccggatctggctgagccc
catgctctagagggtttcatccattattcccaaaagaactatgaacaagcagaaagaagt
tttctaaatgctattgagagaaaggccgaaactgcagagtatcatcagtacctggggctt
acgtactggttcatgagcgatgagacaaaaaaggacaaaggaaaagcactcacccagttc
ttgaaggctgcaaaattggacaactacttgggaagtgtcttttgttatttaggtaactac
tacagagacattgctggagacaaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatggaaccgatgaagaatctggaacagcagctgtagacttaagcgtggaacttgga
gacatggacactgctctgtcaatcctgaatgaggtgactgagaaagcaagtactggtaca
gcgaaatgggcctggcttcatcgtgggctttactacctgagcacggataagccgtcacaa
gcagtggctgatttgcaggcagctgtcagggctgatccaaaggattccaactgctgggag
tctctaggggaggcttacctgagcagagggagctattcaacagctctgaaatccttcagg
aaagcaagtgagctgaacccggggcttgtgtacagcatctacaaaactgcagcagttgag
cagattctgggcaaatatgaaaacgctatatctacctatcaacaaatcttgaagacagaa
gattatgtgcctgcactaaaaggacttggtgagtgctatcttatgctggcaagatcagcc
cttgacaactattttgataggaaggctatggattacatagagcaggcgcttgaatttttt
acaagggcaacaaagctccgtcctgatgtctcttgcctctggaaactgctcggagacacc
tgtactagtgtgcatgttatttcaccatccaaagtgaatattcaagtcctgggatccctt
ctgggtaaaaacacaggcaaagagacgctgaagaagagcgagctgctcaggctgggagga
aggtgttacggcagagctttaaaattgatgcctttggctagcatatggtgtgatcttgga
ataaattattatcgacaagcagaggacctcagagcagtgggctctgacatgaatgaaatc
agtgagctgctagagaagtctttacagtgtctcaaaaaagctgtgaggcttgacagcaaa
aatcatctttgttggaatgctcttggcgtagttgcgtcctgtagtgctattgggaattat
gctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaattaatgttgttgcc
tggaccaacttgggagttttgtatctgtcaactggaaacattgagcaagctcatgaagcc
ttcaagatagcccagtctctggagccttcttacttactgtgttggattgggcaggctctt
attgcggagaacatcggtagctacgatactatggatctcttcaggcacacaactgaactc
agtatgcataacgagggagcaaaaggctatgcccactgggtatgttcaacactgcaggat
aaaagcaacagaaacactgaactatatctgtacaacatagtccaaatgaatgctatcccc
gcagcccaggtggtcttgagcaaatacacagaaaggaatccagacgacgcatctgctttc
tcaatgcttggttatttgaacgagtgtctggatctgaaaaggcaggcggcagatgcctat
gggagggccgcttcattgctgaagaactctgaggatactgagcaatacaacatggcaatg
caaaactatggcaggacactgtgtgccattggtcagtgtgataaggccatcgaggtttac
acgtcaatgtccctaagcgagtttgatggcattgtggggatagcattggcctacttcaag
aaaggactcttagaggaaagcatgaaagcctacgaaaaagccttgtctgtagctgagtct
gaacaagataaagcgcatatcctgactgccttggcaataatagaatataaacagaataaa
gtggatgctgcaaagacactgctgtttaaatgctcattaaaggagccaagtacggaaagt
ctgaaggctttgtgcacgctgggactggtgaagcgggatgctacgcttgcaacagcagcc
ctgaaagagttactgaagcatgaaaaaggggacgatgggatttatgagaggtgccttatt
gcatccgctgtttatgcattgcaaggtagaaacgtgcaggtccagagagaagtctccaaa
gcaatacacagttaccctggtaatcctgccctctggtctcttctgtctcgagtggttcca
ctgtatgcctcacaaaaggcaaaagggggagctgtggcaggagatgtcgcacacgtactt
gatgtaaaccgtggaaaggaagtcctgctcaatattgcagttaatcagttggcagcggga
tgtcatatgttagaagatgagaaaaacaatcccttgaaaaatattcagaaggcaatccac
ctctgtccagataatcctgttgcctgggcagtgctaatggcagcctgtcatgctgaaaac
actgttgtctgtctaaataacacccagccaaagcgaacggatctggagatgacacttgta
tctacagtttcagccaaaactggagaaaataaccttccacataattatatccggactctt
gaagactggtgtctgtgtcaagctattaccagtctagaggagactggcaaactctcagaa
gctgaagctctttgtaccaagggtttaaaaagctgccccgagcacccagctctgtttttg
ttgttgagacaaattcagtgcaagcagctgttgcagactcacaaagaacttccagacaat
gtcctggaggagcttcgcaagacagtcatggccagctcgacttcagttacagcctggcag
tggctggcaaaagtatatcagtcccaaaggatgatggttggagcggagatgtgttacagg
aagagtctgcaattggcgtcacagcagggcagctggagtgggaagttgtccagcctgctc
ggcctcgctatgcttgcactggaagcctgcaaggctaatgtctcaaatgaacactggcca
tccttggttcaggaggcaacaactgaagctttgaagctttctccttgccccctggcaact
ctcctgcaagcactgctgcagtataaccgcaaaatgggagcaagggagactcgtcgaatg
ttggaaagagtggtgtatcagccagggaatccagaaaccatagcatcagtggcacgctgg
tacctcctgcagcacctgcacgccaaagatgatcacgagctaatagaagtgcttatagaa
aatgccaaagctaatggagatgctagagctctggaactacatgagaaattgtcagcaagt
gcctag
DBGET
integrated database retrieval system
