Numenius arquata (Eurasian curlew): 141478164
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Entry
141478164 CDS
T11436
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq04137
Mitophagy - animal
narq04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141478164 (OPTN)
04137 Mitophagy - animal
141478164 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
narq04131
]
141478164 (OPTN)
Membrane trafficking [BR:
narq04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
141478164 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
141478164 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
141478164 (OPTN)
Xenophagy
Cargo receptors
141478164 (OPTN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
DUF6439
EDR4-like_1st
Nuc_rec_co-act
Motif
Other DBs
NCBI-GeneID:
141478164
NCBI-ProteinID:
XP_074023388
LinkDB
All DBs
Position
2:complement(125074910..125093024)
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AA seq
557 aa
AA seq
DB search
MSSKSKSRPAENGEHAKSKTENGTDSMAAPALSTYTPEEMVQQMKELITENNELKEAMKV
HNQAMKDRYEELSVWREKQKEEREFYELKFKEAKQCLLVKCIENEQLQQQLQRLKEREEG
AEMEGCMAPEKEVRQLKSQVQRLQAEKADLLAIISELQVKLNISAEDSFVEIGMNEGELN
RTAKEHQENSGEMTSNVAIYIRSKTADESKNLESEELTVSQLLCCLRNETQKREELEKEL
QDQKERLSKLEKETSNCLESGTQTEQEEEESSEAVGSEVETLNLQVCALFKELQEAHEKL
KEAELIQKKLQEKCQVLERKSLAAASELEEKQELIYTIKKLELQVESMQAEVKLEQAKTH
EEKARCSSLQEAYSKLLSELTEAMKTIDEMKLKELDRVDKVVVEQLNAKVELAEQALAAK
QLQIDEMKQIIAKQEEDLETMTVLRAQMEVYCSDFHAERAAREKIHEEKEQLAVQLAYLL
KEQQNLEDLGRNSLAEMQNRHGARAPDREHSPRLVQRGTGSQDWPEQQNISMYSCPKCQE
ILPDLDTLQIHVMDCIN
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaatcgaagagccgtcctgctgaaaatggagagcatgccaagagtaaaacg
gaaaatggaacggacagcatggctgcccctgcccttagtacctacaccccagaagagatg
gtacaacagatgaaagaactgatcactgagaacaatgagttaaaagaagcaatgaaggtg
cataaccaagctatgaaggaccgatatgaagaactttccgtctggcgagagaagcagaaa
gaagaaagagaattttacgagctaaagtttaaggaggctaagcagtgcttgctagtcaag
tgcattgaaaatgaacagctacagcaacaacttcagagactgaaggaaagggaagaagga
gctgaaatggagggctgcatggctcccgaaaaggaagtgaggcaactgaaatcccaggtg
cagcggcttcaggctgagaaggcagatctgctagccatcatttcagaactgcaggtcaag
ctgaacatctcagcagaggattcctttgtggagatcgggatgaatgaaggagaactaaat
cgaactgcaaaggaacatcaagagaatagtggtgaaatgaccagtaacgttgctatctac
atcaggagcaaaactgcagatgagtcgaagaatttggaatctgaggagctaactgtgagc
cagctgctctgctgccttagaaatgaaactcagaagagggaagaactggagaaggagctt
caggatcagaaagagagactgtcaaagctggagaaagaaaccagcaactgcctggagagt
gggacacaaactgaacaggaagaagaggagagttcagaggctgttggcagtgaagtagaa
accctgaatttgcaagtttgtgctctgtttaaagagcttcaggaagcccatgagaagtta
aaagaagcagaattgattcagaagaagcttcaagagaagtgccaagtactggaaagaaaa
agcttggctgctgcatcagaattggaggagaagcaggagctaatatacaccatcaagaag
ctggaacttcaggtggagagcatgcaggcagaggtcaagctggaacaagcaaagacacat
gaagaaaaggcaagatgtagtagcttgcaggaggcatatagcaaactcctttctgaactc
actgaggcaatgaaaacaattgatgaaatgaaactcaaagagctggacagagtggataaa
gttgtggtggaacaactgaatgcaaaggtggagttggcagaacaagctcttgctgcaaaa
cagctccagatagatgaaatgaagcagattattgctaaacaagaggaggatcttgaaacc
atgactgtgctccgtgctcagatggaggtctattgttctgacttccatgctgagagggca
gcaagagagaagatccatgaggagaaggagcagttggctgtccagctggcatacctgcta
aaagagcagcaaaaccttgaagatcttggccgaaactctttggcggagatgcagaatcgc
cacggagccagggcaccagatcgggagcactcgcctcgccttgtccaaagaggaactggt
agtcaagactggccagagcagcagaatatctcaatgtattcgtgtcccaaatgtcaagaa
attctacctgatttggacacgctgcagattcacgttatggactgcattaattga
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