Numenius arquata (Eurasian curlew): 141478807
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Entry
141478807 CDS
T11436
Symbol
SMARCA4
Name
(RefSeq) LOW QUALITY PROTEIN: transcription activator BRG1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141478807 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
narq03021
]
141478807 (SMARCA4)
03036 Chromosome and associated proteins [BR:
narq03036
]
141478807 (SMARCA4)
Transcription machinery [BR:
narq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
141478807 (SMARCA4)
Chromosome and associated proteins [BR:
narq03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
141478807 (SMARCA4)
Chromatin remodeling factors
BAF complex
141478807 (SMARCA4)
PBAF complex
141478807 (SMARCA4)
GBAF(ncBAF) complex
141478807 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
141478807
NCBI-ProteinID:
XP_074023882
LinkDB
All DBs
Position
Unknown
AA seq
1645 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPLPPQG
PGGYAQDNMHQMHKPMDSMHEKGITEDPRYGQMKGMGLRPGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSGPQMSSGPAGVPLDGTDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSGTGPVQGPVQGPGP
GPTPPNYNRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKL
IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLD
PVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVV
CMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQH
AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLI
DQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD
GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS
EEEEEEEEEEQPAPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA
LARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGL
GKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRA
FVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA
PRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETIL
IIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSE
KDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFE
LLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN
EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLR
LCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDENRYSA
GSGSGSASFPHTASTLCLTAELEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDR
RREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSL
TEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDTEVGGAAATPTTSTRSRDKDEESKKQK
KRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELI
RKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVR
QKIEKEEESEGEDSEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGRRRTSRGSRA
KPVVSDDDSEEEQEEDRSGSGTEED
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactccggatcctcccatgggggggacaccccggccgggaccttccccggggccc
ggcccctcgccgggggccatgctgggtcccagccccggcccctcacccggctccgctcac
agcatgatgggccccagccccgggccgccctcggcgggacaccccctgcccccccagggg
ccggggggctacgctcaggacaacatgcatcagatgcacaagcccatggactccatgcac
gagaagggaataaccgaggaccctcgctacggccagatgaaagggatggggctgcggccc
ggggggcacgcgggaatggggcctcctcccagccccatggatcagcactcgcaaggctac
ccctctccgctcggcggctccgaacatgcctccagcccggtcccggccaacggcccctcc
tccggccctcagatgtcctcggggcccgcgggggtccctttggatggtactgacccccaa
gctctggggcagcagaaccgggggcccaccccgtttaaccagaaccagctgcaccagctg
agagcgcagatcatggcctacaagatgctggccaggggccagcccttgcccgaccacctt
cagatggcggtgcaggggaagcgacccatgcctggaatgcagcagcaaatgccgacacta
cctcccccttccgtctccgggactggaccagtgcaaggaccagtgcaagggcctggaccg
ggaccgacacctccaaactataacagacctcacggtataggagggcctaacatgccccct
cccggaccctcaggagttcccccaggaatgcctgggcaaccccccggcggcccccccaag
ccctggccggaaggaccaatggcgaatgctgcagcccccactagcacacctcaaaaactg
atccccccccagcccaccggccggccctccccggcccccccggccgtgccccccgccgcc
tccccggtgatgccgccccagacgcagtccccggggcagccggcccagcccgcccccatg
gtgcagctccaccagaagcagaaccgcatcacccccatccagaaaccccgagggctcgac
ccggtggaaatcctgcaggagagggagtacaggctgcaggctcgcatcgcccacaggatc
caggagctggagaacctccccggctccctggctggtgacctgagaaccaaagctaccatt
gaactcaaagcactacggctgcttaacttccagcgccagctgcgtcaggaagtggtggtg
tgcatgaggcgggacacggccttggagacggcgctgaacgccaaggcctacaagcgcagc
aagcggcagtccctgcgcgaggcccgcatcaccgagaagctggagaagcagcagaagatc
gagcaggagcggaagcgccggcagaagcaccaggaatacctcaacagcatcctccagcac
gctaaagatttcaaggaataccatcgctctgtcaccggcaaaatccagaagctgaccaag
gcggtggccacctaccacgccaacactgagcgcgagcagaagaaggagaacgagaggatc
gagaaggagcggatgcgccgtttgatggctgaggatgaggaggggtaccgcaagctcatc
gaccagaagaaggacaagcgcttggcctacctgctgcagcagacggacgagtacgtggcc
aacctgacggagctggtgcggcagcacaaggccgcccaggtggccaaggagaagaagaag
aagaagaaaaagaagaaggcggagaacgcggaggggcagacgccggccatcggaccggat
ggcgaaccgctggatgagacgagccaaatgagcgacctcccggtcaaagtgatccacgtg
gagagcgggaagatcctgacgggcacggacgcccccaaggccgggcagctggaggcctgg
ctggagatgaaccccggatatgaagtagctccaagatctgacagtgaagaaagtgggtca
gaagaggaggaggaggaggaggaggaggagcagccggcgccggctcagcccgccctgccc
gtggaggagaagaaaaagatccctgacccagacagcgacgacgtctcggaagtggacgcc
agacacattatcgagaatgcgaagcaagatgtggacgacgaatacggggtgtctcaggcc
ctggcccgggggctccagtcctactacgcggtggcccatgccgtcaccgagagggtggac
aaacagtccacgctgatggtcaacggcgtcctcaagcagtaccagatcaaagggctggag
tggctggtgtcgctgtacaacaacaacctgaacgggatcctggccgacgagatggggctg
ggcaagaccatccagaccatcgctttaatcacatacctcatggagcacaagcgcatcaac
gggcccttcctcatcatcgtacctctctcaactctgtcgaattgggcgtatgagtttgac
aaatgggctccttcggtggtgaaggtctcctacaagggctccccagcagcgagacgggcg
ttcgtacctcagctccgaagtgggaaattcaacgtcttgctcaccacttacgaatatatc
attaaagacaagcacatcctggccaagatccgctggaagtacatgatcgtggacgagggc
caccgcatgaagaaccaccactgcaagctcacccaggtcctcaacacccactacgtggcc
ccgcggcggctgttgctgacggggaccccgctgcagaacaagctgcccgagctctgggcc
ctcctcaacttcctcctccccaccatcttcaagagctgcagcaccttcgagcagtggttc
aacgcccccttcgccatgacgggggagaaggtggatctgaatgaggaagaaaccatcctc
atcatccggcgcctgcacaaggtgctgcgccccttcctgctgcgccggctgaagaaggag
gtggaggcgcagctccccgaaaaggtggagtatgtcatcaagtgtgacatgtcggcgttg
cagagggtcctctacaggcacatgcaggccaagggggtgctgctcaccgacggctccgag
aaggacaaaaaggggaagggcggcacgaagaccctgatgaacaccatcatgcagctgcgg
aagatctgcaaccacccctacatgttccagcacatcgaggaatccttttccgagcacttg
ggcttcacgggagggatcgtgcaaggactggatttgtaccgtgcctcgggcaaatttgag
ctcctggaccgaattctccccaaacttcgagccaccaaccacaaggtgctgctcttctgc
cagatgacctccctcatgaccatcatggaagactacttcgcctatcgcgggttcaaatac
ctcaggctggacgggaccactaaagccgaagaccggggcatgttgttaaagactttcaac
gagccgggctccgagtacttcatttttttgctgagcactcgggcgggggggctggggctg
aacctccagtcggccgacaccgtcatcatctttgacagtgactggaacccccaccaggac
ctgcaggctcaagaccgagcccaccgcatcgggcagcagaacgaggtgcgggttctccgc
ctctgcaccgtcaacagcgtggaggagaagatcctggccgccgccaagtacaagctgaac
gtggaccagaaggtcatccaggccggcatgttcgatcagaaatcctccagccacgagcgg
agagccttcctccaggccatcctggaacacgaggagcaggacgagaacagatacagcgcg
ggcagcggcagtggcagtgcaagcttcccccacactgcctccaccctgtgcctgaccgct
gagttggaggaaccacctctaaaggaggaagacgaggtccccgacgacgaaacggtcaac
cagatgatcgcgcggcacgaggaggagttcgaccttttcatgcgcatggacctggaccgg
cggcgggaggaggcgcggaaccccaagcgcaagccccggctgatggaggaggacgagctg
ccctcctggatcatcaaggacgacgcggaggtggagaggctgacctgcgaggaggaagag
gagaagatgttcgggcgaggctcccggcaccgcaaggaggtggattacagcgactcgctg
accgagaagcagtggctcaaggccatcgaggaggggacgctggaggagatcgaggaggag
gtgcgccagaaaaaatcctcccgcaaacgcaagcgggacacggaggtggggggcgccgcc
gccacccccaccaccagcacccgcagccgcgacaaggacgaggagagcaagaaacagaag
aaacgcggcaggcccccggccgagaaactctcccccaacccccccaacctcaccaaaaaa
atgaagaagatcgtggacgccgtcatcaagtacaaggacagcagcagtggacggcagctg
agcgaggtcttcatccagctgccctcccgcaaggagctccccgagtactacgagctcatc
cgcaaacccgtcgacttcaagaaaatcaaggagcggatccggaaccacaaataccggagc
ctgaatgacctggagaaggacgtgatgctgctctgccagaacgcccagaccttcaacctg
gagggctccctgatctacgaggattccatcgtcctccagtccgtcttcaccagcgtccgg
cagaaaatcgagaaggaggaggagagcgagggcgaggacagcgaggaggaggaggaagga
gaggaggaaggatccgaatccgagtcgcgctcggtgaaggtgaagatcaagttggggagg
aaggagaaggcccaggaccggctgaaggggcggcgcaggaccagccgcggctcccgcgcc
aaacccgtggtcagcgacgacgacagcgaggaggagcaggaggaggatcgttccggcagc
ggcaccgaagaagactga
DBGET
integrated database retrieval system
