Numenius arquata (Eurasian curlew): 141479445
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Entry
141479445 CDS
T11436
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
narq Numenius arquata (Eurasian curlew)
Pathway
narq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
narq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141479445 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
narq03021
]
141479445 (TAF5L)
03036 Chromosome and associated proteins [BR:
narq03036
]
141479445 (TAF5L)
Transcription machinery [BR:
narq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
141479445 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
141479445 (TAF5L)
Chromosome and associated proteins [BR:
narq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
141479445 (TAF5L)
STAGA complex
141479445 (TAF5L)
TFTC complex
141479445 (TAF5L)
SAGA complex
141479445 (TAF5L)
SLIK complex
141479445 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
TFIID_NTD2
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_Aladin
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Tricorn_2nd
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
Ge1_WD40
WD_LRWD1
eIF2A
Mala_s_1-like
Nbas_N
Motif
Other DBs
NCBI-GeneID:
141479445
NCBI-ProteinID:
XP_074024727
LinkDB
All DBs
Position
2:21937198..21957967
Genome browser
AA seq
598 aa
AA seq
DB search
MQALLKITVMKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSE
SGCANVVSAAPCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNG
LKSTVDSFYSRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDS
YNYLLRYLQSDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNGLEPSDVPAS
ILQNEAALDLLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSC
VKLWSLRSRKLKSEPHLVDVSRIRLACDILDEEEEEDDSAGTEMKILRGHCGPVYSTRFL
SDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLW
SFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPV
LALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMD
NSVRVWDIRNTYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctcttctaaaaatcacagtcatgaaacgcgtacgcacagaacagattcagatg
gcagtatcctgctacctcaagcgccgtcagtatgtggactccgaaggtcccctaaaacaa
gggctgaggctgtgtcagactgctgaagagatggcagctaatctcacagtccaatctgaa
tctggttgtgccaacgttgtgtctgcagctccctgcctggcagagccacagcaatatgaa
gtacaatttggacgattacgcaattttctcacagattcagattctcagcacagccatgaa
gtgatgcctcttctgtatcccctcttcgtctacctccatctgaacatggtccagaatggc
ctaaaaagcacagtggacagtttttacagccgcttccatggcatgttcttgcagaatgcc
agccagaaggatatcattgagcagttgcagactaccatgactattcaagatatcctgtcc
aacttgaagctccgggcttttctggacaacaaatatgtcatccgccttcaagaggacagc
tacaactaccttcttcgctacctccaaagtgacaacaacaacgccctgtgcaaagtcctg
accttgcacattcacctggatgtgcagcccgccaagaggactgactatcagctctacgcc
ggtgggagctcctcacgcaacgagagcaacggcctggaacccagcgacgtgccggcttcc
attctgcagaacgaggcagcgctggatttactgcaggacagcattaaacgtgtcaaggat
gggcccccttccttaacgaccatctgtttctatgccttctataacacggagcagttgctg
aacactgcagagatttcaccaaatagcaagctgctcgctgctgggttcgataattcatgt
gtgaagctgtggagtctgcgttccaggaagttaaaatctgagccccacctcgttgatgtg
tcccgcatccgcctggcttgtgacatcctggatgaggaggaggaagaggatgacagcgca
ggcacagaaatgaagatcctgagaggacactgtggacctgtgtatagcacgaggttcctt
tcagacagttcaggactcttatcttgttccgaggacatgtccatcagatactgggatctc
agaagttttacaaacactgtgttgtaccaaggacatgcctatcctgtctgggatttggat
attagcccctgcagcctgtactttgccagtggttcccacgatcgcactgcaaggctctgg
tcatttgatcggacgtacccgctgcgaatatacgcgggccatttggcggacgtagactgt
gtcaagttccaccccaattccaactatttggcgacgggctccacggacaaaactgtgcgc
ctgtggagcactcagcaaggcaactcggtgcgtcttttcactgggcaccgtggccctgtg
ctagcgcttgctttttctcccaacggtaagtacctggcatcagcaggtgaagaccagcgg
ctaaagctgtgggacttggcctcaggaactctttacaaagaactgagggggcacacggac
aacataaccagccttacttttagccccgacagtagtttaattgcttcggcatcgatggac
aattcagtccgggtctgggacattcggaacacttactgcaacgcccctgcagatgggtct
tccagtgaactggttggtgtatataccggacaaatgaataatgtactgagcgtacagttt
atggcctgtaatcttcttctagtgactggaattgcacaagaaaaccaggaacattaa
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