Natronorubrum aibiense: GCU68_00010
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Entry
GCU68_00010 CDS
T06256
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nas
Natronorubrum aibiense
Pathway
nas04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GCU68_00010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nas03019
]
GCU68_00010
03009 Ribosome biogenesis [BR:
nas03009
]
GCU68_00010
04131 Membrane trafficking [BR:
nas04131
]
GCU68_00010
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nas04147
]
GCU68_00010
Messenger RNA biogenesis [BR:
nas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
GCU68_00010
Ribosome biogenesis [BR:
nas03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
GCU68_00010
Membrane trafficking [BR:
nas04131
]
SNARE
SNARE associated proteins
Others
GCU68_00010
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GCU68_00010
Exosome [BR:
nas04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GCU68_00010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
TIP49
AAA_33
AAA_14
AAA_22
RNA_helicase
NPHP3_N
nSTAND3
AAA_28
AAA_7
Mg_chelatase
AAA_25
IstB_IS21
AAA_lid_PRS2_C
AAA_3
ABC_tran
NB-ARC
AAA_24
AAA_17
AAA_18
DUF815
TsaE
Sigma54_activat
AAA_30
AAA_11
PhoH
Parvo_NS1
ATPase
SLFN-g3_helicase
Zeta_toxin
bpMoxR
Vps4_C
Bac_DnaA
Zot
HJURP_C
Motif
Other DBs
NCBI-ProteinID:
QFU81053
UniProt:
A0A5P9NYR5
LinkDB
All DBs
Position
101..2365
Genome browser
AA seq
754 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRVSMRELDLENGDYIVIKGKGDNQSVARVWPGYPEDEGR
GIVRIDGRLRQEADVGIDDRVEIEAADVNPAKSVTVALPQNLRIRGDIGPLVRDKLSGQA
VTEGQTVPFSLSFGPMASSGQSVPLKIASSSPSGTVVITDSTNIEISETPAEQVSAGPGA
SPEGVPDVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTL
MAKAVANEIDAHFETISGPEIMSKYYGESEEKLREVFEEAEENAPSIVFIDELDSIAPKR
EEAGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDDIDPALRRGGRFDREIEIGVPD
KEGRKEILQVHTRGMPLTDSVDLEHYASNTHGFVGADLESLARESAMNALRRIRPELDLE
SEEIDADVLDRLQVNKQDFKEALKGIQPSAMREVFVEVPDVTWNDVGGLGDTKERLRETI
QWPLDYPEVFEAMDMDAAKGVMMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKYVG
ESEKGVREIFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEEL
EDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEEGRKKIFEVHTRNKPLADTVDLDD
LAARTEGYVGADIEAVTREASMAASREFITSVDPEDIGDSVGNVRISTEHFDHALEEVGP
SVTPETRERYEELEEEFQQAEPTPEEDQLGRTFQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccgtcaaaccactgaaacagaaggacgcagggcgtggactggccgcgatc
gaccgcgtctcgatgcgcgaactcgacctcgaaaacggcgattacatcgttatcaagggg
aaaggtgacaaccagtccgtcgcccgcgtctggccgggctatcccgaagacgaaggccgc
gggatcgtccggatcgacggccgcctgcgacaggaagccgacgtcgggatcgacgaccgt
gtcgagatcgaagccgcggacgtcaatcccgcgaaatcggtcacggtcgcgctcccgcag
aacctgcgcattcgtggcgacatcgggccgctcgtgcgcgacaaactcagcgggcaggcc
gtcaccgagggccagacggtaccgttctcgctgtcgttcggcccgatggccagctccggc
cagtcggtcccgctgaagatcgcgagcagttcgccctcgggcacggtcgtcatcacggac
tcgacgaacatcgagatctccgagacgccggccgagcaggtcagcgccggaccgggcgcg
tccccggaaggcgtcccggacgtcacctacgaggacatcggcggcttagacgacgaactc
gatcaggtccgcgagatgatcgagctgccgatgcgccaccccgaactgttccaacagctc
ggtatcgaaccgccgaagggcgtcctcctgcacggcccaccgggcaccgggaagaccctc
atggcgaaagcggttgccaacgagatcgacgctcacttcgagacgatctccggcccggag
atcatgtcgaagtactacggtgaaagcgaggagaaactccgcgaggtgttcgaggaggcc
gaagagaacgccccctcgatcgtcttcatcgacgaactcgactccatcgcaccaaagcgc
gaagaagccggcggtgacgtcgaacggcgcgtcgtcgcccagctgctcagcctgatggac
ggcctcgaggagcgcggtcgtgtgaccgtcatcgcagcgaccaaccgggtcgacgacatc
gaccccgcgctccggcgtggcggtcgcttcgaccgcgagatcgaaatcggcgtaccggac
aaggaagggcgcaaggagatcctgcaggtccacacccgcgggatgcccctgactgactcg
gtcgatctggaacactacgcgtccaacacccacggcttcgtcggtgccgacctcgagtcg
ctcgctcgagagagcgcgatgaacgccttgcgtcgcatccgcccggaactcgacctcgag
tccgaggagatcgacgccgacgtgctcgaccgcctgcaggtcaacaagcaagacttcaag
gaagcgctcaagggaatccagccctcggcgatgcgggaagtcttcgtcgaagtccccgac
gtcacgtggaacgacgtcggcggccttggcgacaccaaagaacgcctgcgcgagaccatc
cagtggccactcgactaccccgaggtgttcgaggccatggacatggacgccgccaaaggc
gtcatgatgtacggcccgccgggcaccgggaagacgctgctcgccaaagccgtcgccaac
gaggccgaatcgaacttcatctcgatcaaaggccccgaactgctgaacaagtacgtcggc
gagtccgagaagggcgtccgtgagatcttcgagaaggcgcggtcgaacgcaccgaccgtg
atcttcttcgacgagatcgactcgatcgccggcgaacgcggccagcgacagggtgactcc
ggcgtcggcgaacgcgtcgtctcccagctgctgaccgaactcgacgggctcgaggaactc
gaggacgtcgtcgtcatcgcgaccacgaaccgccccgacctgatcgactcggcactgctc
cgtcccggccggctggaccgtcacgtccacgttcccgtccccgacgaggagggccgcaag
aagatcttcgaggtccacacccgcaacaagccgctggccgatacggtcgacctcgacgac
ctcgctgccagaacggagggctacgtcggtgccgacatcgaagccgtcacccgcgaggcc
tcgatggccgccagccgcgagttcatcacctcggtcgatcccgaggatatcggagactcc
gtcggcaacgtccgcatcagtacggagcacttcgaccacgcgctcgaggaagtcgggccg
agcgtgacgcccgagacgcgcgaacgctacgaggaactcgaagaggagttccagcaggcc
gaaccgaccccggaagaagaccagctcggtcgcaccttccagtaa
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