Natronorubrum aibiense: GCU68_00605
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Entry
GCU68_00605 CDS
T06256
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nas
Natronorubrum aibiense
Pathway
nas03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nas00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GCU68_00605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nas03021
]
GCU68_00605
Transcription machinery [BR:
nas03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
GCU68_00605
Prokaryotic type
Archaeal type
TFB
GCU68_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
DZR
FYDLN_acid
Zn_ribbon_Nudix
YopD
Auto_anti-p27
Zn_ribbon_RPB9
DUF8054_C
C1_1
DZR_2
Trm112p
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
QFU81155
UniProt:
A0A5P9NZ33
LinkDB
All DBs
Position
complement(109700..110671)
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AA seq
323 aa
AA seq
DB search
MTDTRIRTYTNETEEEESTERTGEKEYCPECGGRLVSDTEHAETVCSDCGLVVEEDEIDR
GPEWRAFDASEKDEKSRVGAPTTKMMHDQGLSTNIGWQDKDAYGRALSSRQRQKMQRLRT
WNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALEEDLLPGRSIEGV
ATASLYAAARQAGTPRSLDEISAVSRVEKMELTRTYRYIIRELGLEVKPADPEHYVPRFV
SDLDLSDETERMARELLESARQEGVHSGKSPVGLAAAAVYAAALLTNEKVTQNDVSDVAS
ISEVTIRNRYKELLEASDSAAPA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgacagacactcgaattagaacctatacgaacgaaacggaagaggaagaatcgaccgag
cggacgggtgagaaggagtactgcccggagtgtggtggacgactcgtctcggacacggaa
cacgccgagacggtctgtagcgactgcgggctcgtcgtcgaagaagacgagatcgaccgt
ggccccgagtggcgagcgttcgacgccagcgagaaagacgagaaatcccgcgtcggagcc
cccacgacgaagatgatgcacgaccagggactctcgacgaacatcggctggcaggacaaa
gacgcctacggccgcgcgctctcgagtcgccagcgccagaagatgcagcgcctgcgcacg
tggaacgagcgcttccgtactcgtgactcgaaagagcgcaacctcaaacaggcgctgggt
gagatcgatcgcatggcctcggcgcttggcctgcccgagaacgtacgcgagacggcaagt
gtcatctaccgacgtgccttagaggaggacctgcttccgggccgatcgatcgaaggcgtc
gcaacggcgtcgctgtacgccgcggctcgacaggcgggcacgccgcggagcctcgacgag
atctcggccgtcagccgcgtcgagaagatggagctgacccgaacctaccggtacatcatc
cgggaactcggcctcgaagtcaaaccggccgaccccgaacactacgtcccacggttcgtc
agcgacctcgacctctcggatgagaccgaacgcatggctcgcgaactgctcgagtcggct
cgacaggaaggcgtccacagtggtaagtcgccggtcggcctcgccgccgccgccgtctac
gccgctgccctgctgaccaacgagaaggtcacgcaaaacgacgtcagcgacgtcgccagc
atctcggaagtgacgatccgaaaccggtacaaggaactgctcgaagcctccgattcggcg
gctcccgcataa
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