Natronorubrum aibiense: GCU68_05300
Help
Entry
GCU68_05300 CDS
T06256
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
nas
Natronorubrum aibiense
Brite
KEGG Orthology (KO) [BR:
nas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nas03016
]
GCU68_05300 (thpR)
Enzymes [BR:
nas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GCU68_05300 (thpR)
Transfer RNA biogenesis [BR:
nas03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GCU68_05300 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
QFU81985
UniProt:
A0A5P9P1H6
LinkDB
All DBs
Position
complement(1059591..1060148)
Genome browser
AA seq
185 aa
AA seq
DB search
MRLFVSVDLPDDLASAFADLQAEFEDASGLNFTDPEQAHVTLKFLGDVDEDRLPAVEREF
ETAVDEANVDPFTVRYGGLGVFPSLEYISVVWVGTETGGEELTRLHEAIERRTTDLGFEA
ESHEFTPHVTLARMDHAGGKELVQDLVTEREPTIGETHVDEVCLTESTLTSEGPEYSTVA
QFSLE
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgttcgtcagcgtcgaccttcccgacgacctcgcgtcggcgttcgccgacctg
caagccgagttcgaagacgcgagcgggctcaacttcaccgaccccgaacaggcccacgtg
acgctgaagttcctcggtgacgtcgacgaagaccgcctaccggccgtcgagcgcgaattc
gagaccgccgtcgacgaggccaacgtcgaccccttcaccgtccgctacggtggcctcggc
gtcttcccgagcctcgagtacatcagcgtcgtctgggtcggcaccgaaaccggtggcgag
gaactcacccggttgcacgaggcgatcgaacgccgaacgaccgacctagggttcgaggcg
gagtcccacgagtttacgccacacgttacgctcgcgcggatggaccacgccggtgggaag
gaactggtgcaggacctcgtcaccgagcgcgagccgacgatcggcgaaacccacgtcgac
gaggtgtgcctgaccgagagcacactcaccagcgagggaccagagtactcgacggtcgcg
cagttctcgctcgagtaa
DBGET
integrated database retrieval system
