KEGG   Natronorubrum aibiense: GCU68_05875
Entry
GCU68_05875       CDS       T06256                                 
Name
(GenBank) recombinase RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nas  Natronorubrum aibiense
Pathway
nas03410  Base excision repair
nas03430  Mismatch repair
nas03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GCU68_05875
   03430 Mismatch repair
    GCU68_05875
   03440 Homologous recombination
    GCU68_05875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nas03400]
    GCU68_05875
DNA repair and recombination proteins [BR:nas03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     GCU68_05875
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     GCU68_05875
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      GCU68_05875
SSDB
Motif
Pfam: DHH_CID DHHA1 DHH DUF2529
Other DBs
NCBI-ProteinID: QFU82089
UniProt: A0A5P9P1S9
LinkDB
Position
1180469..1181965
AA seq 498 aa
MAGPIPELEECATRCARRLREADRVLLASHIDADGLTSAAIAAQALERARIPFETVFEKQ
LDEDAIAAIAATEYDTVLFTDFGSGQLDVISEYESDNAFTPVIADHHQPATIDEDGESVR
VDTDYHLNPLLFGINGASELSGAGASYVLARALAAVSDQQPDEPVATDGGTTTAARSDNR
DLAALAVVGAVGDMQASGGELHGANAKIVAEGVDAGVVETGKDLALYGKQTRPLPKLLEY
ATDVHIPGISNDANGALRFLDGLDLELKRDGEWRRWAGLTNDEKQTVASALVKRAVSSGV
PATKIDGLVSTAYVLPDEPVGTELRDASEFSTLLNATARYERADVGLGVCLGDRGEALER
ARKLLRDHRRNLSEGIDLVTQEGVTHEDNLQWFHAGDRIRETIVGIVAGMAMGNQGISRS
KPIIAFADKDDEHVKVSARGTHSLVRNGLDLSVVVGEASRAVGGDGGGHDVAAGATVPKG
DENVFIERADAIVGEQLS
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggctgggccgattcccgaactcgaggagtgtgcgacgcgctgtgcaaggcggctccgt
gaggccgaccgtgtcttgttggcctcacacatcgacgccgacggactgaccagcgccgcg
atcgccgcccaggcgctcgagcgggcacggattcccttcgagacggttttcgagaaacaa
ctcgacgaggacgcgatcgccgcgatcgcggcgaccgagtacgacaccgtcctctttacc
gacttcgggagcggccaactcgacgtcatcagcgaatacgaatccgacaacgcgttcacc
ccggtgatcgcggaccaccaccagccggcgacgatagacgaggacggtgagtcggtccgc
gtcgacaccgactaccacctcaacccgttgctgttcggcatcaacggcgcgtccgaactc
tccggcgccggtgcgagttacgtcctcgcgcgcgcactcgctgcggtctcggaccagcag
ccggacgagccggtcgcgaccgatggcggaacaaccactgctgcccgctcggacaaccgc
gatctcgctgcgctggccgtcgtcggtgccgtcggcgacatgcaggcctccggcggcgaa
ctccacggcgcgaacgcgaagatcgtcgccgagggcgtcgacgccggcgtcgtcgagacc
ggcaaggacctcgcgctgtacggcaaacagacccggcccctgccgaaactgctcgagtac
gccaccgacgtccacattcccggcatctccaacgacgccaacggcgcgttgcgctttctg
gacggactcgacctcgagttgaaacgcgacggcgagtggcgacggtgggctgggctcacg
aacgacgaaaagcagaccgtcgccagcgcgctcgtcaaacgggccgtctcgagtggcgtc
ccggcgacgaagatcgacggcctcgtcagcacggcctacgtcctgcccgacgaacccgtc
ggcaccgaactccgggatgcaagcgagttctcgacgctgctcaacgcgaccgcgcgctac
gaacgtgccgacgtcggtctcggcgtctgtctcggtgatcgaggcgaggcgctcgagcgg
gcccgaaagctcctgcgcgatcaccggcgtaacctctccgaaggaatcgatctggtcaca
caagagggcgtcacccacgaggacaacctccagtggttccacgcgggtgaccgtatccgt
gagacgatcgtcggtatcgtcgcggggatggcgatgggaaatcaggggatcagtcgctcg
aagccgatcatcgccttcgccgacaaagacgacgagcacgtcaaggtctcggctcgcggc
acccacagtctcgtccgaaacggcctcgatctctccgtcgtcgtcggcgaggcctcgcgt
gccgtcggcggcgatggcggcggtcacgacgtggctgccggggcgacagttccgaaagga
gacgaaaatgtgttcatcgaacgggcagacgcgatcgtcggcgagcagctatcctga

DBGET integrated database retrieval system