Natronorubrum aibiense: GCU68_05875
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Entry
GCU68_05875 CDS
T06256
Name
(GenBank) recombinase RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nas
Natronorubrum aibiense
Pathway
nas03410
Base excision repair
nas03430
Mismatch repair
nas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCU68_05875
03430 Mismatch repair
GCU68_05875
03440 Homologous recombination
GCU68_05875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nas03400
]
GCU68_05875
DNA repair and recombination proteins [BR:
nas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GCU68_05875
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GCU68_05875
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GCU68_05875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
DUF2529
Motif
Other DBs
NCBI-ProteinID:
QFU82089
UniProt:
A0A5P9P1S9
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All DBs
Position
1180469..1181965
Genome browser
AA seq
498 aa
AA seq
DB search
MAGPIPELEECATRCARRLREADRVLLASHIDADGLTSAAIAAQALERARIPFETVFEKQ
LDEDAIAAIAATEYDTVLFTDFGSGQLDVISEYESDNAFTPVIADHHQPATIDEDGESVR
VDTDYHLNPLLFGINGASELSGAGASYVLARALAAVSDQQPDEPVATDGGTTTAARSDNR
DLAALAVVGAVGDMQASGGELHGANAKIVAEGVDAGVVETGKDLALYGKQTRPLPKLLEY
ATDVHIPGISNDANGALRFLDGLDLELKRDGEWRRWAGLTNDEKQTVASALVKRAVSSGV
PATKIDGLVSTAYVLPDEPVGTELRDASEFSTLLNATARYERADVGLGVCLGDRGEALER
ARKLLRDHRRNLSEGIDLVTQEGVTHEDNLQWFHAGDRIRETIVGIVAGMAMGNQGISRS
KPIIAFADKDDEHVKVSARGTHSLVRNGLDLSVVVGEASRAVGGDGGGHDVAAGATVPKG
DENVFIERADAIVGEQLS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggctgggccgattcccgaactcgaggagtgtgcgacgcgctgtgcaaggcggctccgt
gaggccgaccgtgtcttgttggcctcacacatcgacgccgacggactgaccagcgccgcg
atcgccgcccaggcgctcgagcgggcacggattcccttcgagacggttttcgagaaacaa
ctcgacgaggacgcgatcgccgcgatcgcggcgaccgagtacgacaccgtcctctttacc
gacttcgggagcggccaactcgacgtcatcagcgaatacgaatccgacaacgcgttcacc
ccggtgatcgcggaccaccaccagccggcgacgatagacgaggacggtgagtcggtccgc
gtcgacaccgactaccacctcaacccgttgctgttcggcatcaacggcgcgtccgaactc
tccggcgccggtgcgagttacgtcctcgcgcgcgcactcgctgcggtctcggaccagcag
ccggacgagccggtcgcgaccgatggcggaacaaccactgctgcccgctcggacaaccgc
gatctcgctgcgctggccgtcgtcggtgccgtcggcgacatgcaggcctccggcggcgaa
ctccacggcgcgaacgcgaagatcgtcgccgagggcgtcgacgccggcgtcgtcgagacc
ggcaaggacctcgcgctgtacggcaaacagacccggcccctgccgaaactgctcgagtac
gccaccgacgtccacattcccggcatctccaacgacgccaacggcgcgttgcgctttctg
gacggactcgacctcgagttgaaacgcgacggcgagtggcgacggtgggctgggctcacg
aacgacgaaaagcagaccgtcgccagcgcgctcgtcaaacgggccgtctcgagtggcgtc
ccggcgacgaagatcgacggcctcgtcagcacggcctacgtcctgcccgacgaacccgtc
ggcaccgaactccgggatgcaagcgagttctcgacgctgctcaacgcgaccgcgcgctac
gaacgtgccgacgtcggtctcggcgtctgtctcggtgatcgaggcgaggcgctcgagcgg
gcccgaaagctcctgcgcgatcaccggcgtaacctctccgaaggaatcgatctggtcaca
caagagggcgtcacccacgaggacaacctccagtggttccacgcgggtgaccgtatccgt
gagacgatcgtcggtatcgtcgcggggatggcgatgggaaatcaggggatcagtcgctcg
aagccgatcatcgccttcgccgacaaagacgacgagcacgtcaaggtctcggctcgcggc
acccacagtctcgtccgaaacggcctcgatctctccgtcgtcgtcggcgaggcctcgcgt
gccgtcggcggcgatggcggcggtcacgacgtggctgccggggcgacagttccgaaagga
gacgaaaatgtgttcatcgaacgggcagacgcgatcgtcggcgagcagctatcctga
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