Natronorubrum aibiense: GCU68_06195
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Entry
GCU68_06195 CDS
T06256
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
nas
Natronorubrum aibiense
Pathway
nas03022
Basal transcription factors
nas03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nas00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GCU68_06195
09124 Replication and repair
03420 Nucleotide excision repair
GCU68_06195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nas03021
]
GCU68_06195
03036 Chromosome and associated proteins [BR:
nas03036
]
GCU68_06195
03400 DNA repair and recombination proteins [BR:
nas03400
]
GCU68_06195
Enzymes [BR:
nas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GCU68_06195
Transcription machinery [BR:
nas03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GCU68_06195
Chromosome and associated proteins [BR:
nas03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
GCU68_06195
DNA repair and recombination proteins [BR:
nas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GCU68_06195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
SLFN-g3_helicase
PhoH
HBB
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QFU84115
UniProt:
A0A5P9P7J8
LinkDB
All DBs
Position
complement(1247165..1249546)
Genome browser
AA seq
793 aa
AA seq
DB search
MTYWRSIFGHAEPYDEQVDGIETTIDTARDGGYTVVEGACGTGKTMIALTAGIELVRDPD
TDYERVFVLTSVKQQLRQFEADLKTINENLPDDWDPISGLTLVGKADVCPYNREGAGGID
DGNVYDRCETLRDRTRDLTGEGGETTAASLAASARQQQTGLADSGRSGSIGRFLETAGET
AAYPPEMPTYSDGGPVGAETEYCPFYAQYLEDLPEEGSDGDASEAVPYDFTEAGMITPDD
LVARSVAHGSCPHSIMGAVLGHVEVVLGNYYHAFDPRTTGSFTGALLDDSTFVVCDEAHM
LEPRVRDLVSDGVADTTLRDAETELSRVIQPIKFEREGRRAEGGSKTADADLVRAELEDS
DVSFEELNRTLEFIRDLREELDRRVTAYLDRNHRGWRSNLHDLDDAELPLRDPSEPAEDE
LTAWAREAGHSDAEWVRAESVGAVVERILNEAEDEDRTRAAPAVGRILGEWYRQNHTDYF
REIELERTWDETEPADSWRRAYSARLALHNCVPSDAIGDRLAAFGGGILMSATLEPMDAF
TEVTGLEFLAREEDRPVVERRYGLHFPEENRESFAVSVPKFTYENRGRPDEDTQTRTIYT
DAITKIGRLPGNVLVGMPSYAEAEWIAGCLEDRLEKPVLLDAASDDETTQLLKREFFAGE
GKVLVTSLRGTLTEGVDYSGDRLSAAVVCGVPIVNTSSPRTAAVRRAYDDAFGDGFTYAL
TIPAVRKARQAIGRVIRSPDDVGVRVLLDERYARESWDSVRPYLPGDDEFQPVSPDMLGM
GLERFRSRLDAEP
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgacgtactggcgttcgatcttcggccacgccgaaccctacgacgagcaggtcgacggc
atcgagaccacgatcgacactgctcgagatggtggctacaccgtcgtcgagggggcctgt
ggcactggcaagacgatgatcgcgctcacagcgggcatcgagctcgtgcgcgatccggac
accgactacgagcgcgtgttcgtgctcacgagcgtcaaacagcaactgcgccagttcgaa
gccgacctcaagacgatcaacgagaacctgcccgacgactgggaccccatttcgggactc
acgctcgtcgggaaagccgacgtctgtccgtacaaccgcgaaggagcgggtgggatcgac
gacggcaacgtctacgaccgctgtgagacccttcgggaccgaactcgagatctcaccggc
gaaggcggggagacgaccgctgcaagcctcgccgcgagcgcgcgccagcaacagaccggc
ctcgctgacagcggccgctcgggctcaatcgggcgatttctcgagaccgccggcgagaca
gctgcctaccccccagagatgccgacctactctgacggcggccccgttggtgccgaaacc
gagtactgtccgttctacgcccagtaccttgaggacctccccgaggaaggtagcgatggc
gacgcgagcgaggctgttccctacgatttcaccgaagccgggatgatcacgcccgacgat
ctcgtcgcgcgctcggttgcccacggcagctgtccccactcgatcatgggggccgtcctc
gggcacgtcgaggtcgtgctcggaaactactaccacgcgttcgatccgcggacgaccggc
tcgtttaccggcgcgttgctcgatgactcgacgttcgtcgtctgtgacgaggcccacatg
ttagagccacgcgtgcgcgacctcgtcagtgacggcgttgccgacacgacgcttcgcgac
gccgaaaccgaactctcgagggtcatccagccgatcaaattcgaacgcgaggggcgacgc
gccgagggcggctcgaagacggccgacgccgacctcgtgcgcgcggaactcgaggacagc
gacgtctccttcgaggaactgaatcgcaccctcgagttcatccgcgatctccgggaggaa
ctcgatcgtcgggtgacggcgtatctcgaccggaaccacagggggtggcgatcgaatctc
cacgatctcgacgacgcggagctcccgcttcgagatccgtccgaaccggccgaagacgaa
ctcacggcgtgggcgcgcgaggcgggccacagcgatgccgagtgggtccgcgccgagtcc
gtcggggccgtcgtcgaacggattttgaacgaggccgaagacgaagaccgaacccgcgcg
gcgcccgcggtcgggcgcatcctcggcgagtggtaccgacagaaccacaccgactacttc
cgggagatcgaactcgagcgaacctgggacgagaccgaaccggccgactcgtggcggcgg
gcctatagcgcccgtcttgccttgcacaactgcgtgccgagcgacgcgatcggcgatcgg
ctcgcggcctttggcggcgggatcctcatgagcgcgaccctggaaccgatggacgcgttc
acggaggtgacgggtctcgagttcctcgcacgcgaagaagacagacccgtcgtcgagcga
cgctacgggttgcactttcccgaagaaaatcgcgagagcttcgcggtgtcggtcccgaaa
ttcacgtacgagaaccgcggccgacccgacgaggacacccagaccagaacgatatacacg
gatgcgatcacgaaaatcggccggcttccggggaacgttctcgtcgggatgccgagttac
gccgaagccgagtggatcgccggctgcctcgaggaccgcctcgagaaacccgttttgctc
gacgctgcgagcgacgacgagacgacccagttactcaaacgcgagttcttcgcgggcgag
gggaaggtgctcgttacgagtctccgtggcacgctgaccgagggcgtcgactacagtggc
gaccggctctcggcggccgtcgtctgtggcgtcccgatcgtcaacacctcgagcccgcgg
actgcggcggttcggcgagcctacgacgacgcgttcggcgacggctttacgtacgcgctg
acgatccccgccgtacgaaaggcccgacaggcgatcggtcgcgtcatccggtcgcccgac
gacgtcggcgttcgggttctgttggacgaacgctacgctcgcgaaagctgggattccgtc
cgaccgtatctacccggcgacgacgagttccagcccgtcagtcccgatatgctcgggatg
ggactcgagcggtttcgctcccgcctcgacgcggagccgtag
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