Natronorubrum aibiense: GCU68_10800
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Entry
GCU68_10800 CDS
T06256
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
nas
Natronorubrum aibiense
Pathway
nas03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nas00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GCU68_10800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nas03021
]
GCU68_10800
Transcription machinery [BR:
nas03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
GCU68_10800
Prokaryotic type
Archaeal type
TFE
GCU68_10800
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Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Rad50_zn_hook
DNA_ligase_ZBD
Sigma70_r3
Zn_ribbon_CLPX_N
DUF7129
Zn_ribbon_6
Zn_ribbon_LysW
Zn_ribbon_3
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QFU82987
UniProt:
A0A5P9P4T7
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Position
complement(2198146..2198670)
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AA seq
174 aa
AA seq
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MAFEDLLEDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAEDLDLELNDVRRALFILY
ENDLATYRRLRDEDSGWLTYLWTFEYDNIPENLEEEMYRLHDALEERREYERNHEFYLCE
ICSIRFEFGEAMDFGFECPECGSPLESMDNDRLVRSMDDRLDALEDELNIDADA
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggacctgctcgaggatccggtcatccagaagtatttacacgagctggtc
ggtcccacgggaatgcccgtcgcggcagcgccgccggacggggaagtgaccgacgaggag
ctcgccgaggatctggacctcgagttgaacgacgtacgccgggcgctgtttattctgtac
gaaaacgacctcgcaacctaccgacggctgcgagacgaggactcggggtggctgacctat
ctctggaccttcgagtacgacaacatcccggagaacttagaagaggagatgtaccgactc
cacgacgcgctcgaagagcgccgggagtacgagcgcaaccacgagttctatctctgtgag
atctgttccatccgcttcgagttcggcgaggcgatggacttcgggttcgaatgtcccgaa
tgtggctcgccgctcgaatcgatggacaacgaccgactcgtcagatcgatggacgatcgc
ctcgacgcgctcgaggacgaactcaacatcgacgcggacgcctaa
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