KEGG   Natronorubrum aibiense: GCU68_10800
Entry
GCU68_10800       CDS       T06256                                 
Name
(GenBank) transcription factor
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
nas  Natronorubrum aibiense
Pathway
nas03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nas00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GCU68_10800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nas03021]
    GCU68_10800
Transcription machinery [BR:nas03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     GCU68_10800
 Prokaryotic type
  Archaeal type
    TFE
     GCU68_10800
SSDB
Motif
Pfam: TFIIE_alpha Rad50_zn_hook DNA_ligase_ZBD Sigma70_r3 Zn_ribbon_CLPX_N DUF7129 Zn_ribbon_6 Zn_ribbon_LysW Zn_ribbon_3 Zn_ribbon_8
Other DBs
NCBI-ProteinID: QFU82987
UniProt: A0A5P9P4T7
LinkDB
Position
complement(2198146..2198670)
AA seq 174 aa
MAFEDLLEDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAEDLDLELNDVRRALFILY
ENDLATYRRLRDEDSGWLTYLWTFEYDNIPENLEEEMYRLHDALEERREYERNHEFYLCE
ICSIRFEFGEAMDFGFECPECGSPLESMDNDRLVRSMDDRLDALEDELNIDADA
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcttttgaggacctgctcgaggatccggtcatccagaagtatttacacgagctggtc
ggtcccacgggaatgcccgtcgcggcagcgccgccggacggggaagtgaccgacgaggag
ctcgccgaggatctggacctcgagttgaacgacgtacgccgggcgctgtttattctgtac
gaaaacgacctcgcaacctaccgacggctgcgagacgaggactcggggtggctgacctat
ctctggaccttcgagtacgacaacatcccggagaacttagaagaggagatgtaccgactc
cacgacgcgctcgaagagcgccgggagtacgagcgcaaccacgagttctatctctgtgag
atctgttccatccgcttcgagttcggcgaggcgatggacttcgggttcgaatgtcccgaa
tgtggctcgccgctcgaatcgatggacaacgaccgactcgtcagatcgatggacgatcgc
ctcgacgcgctcgaggacgaactcaacatcgacgcggacgcctaa

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