Natronorubrum aibiense: GCU68_12420
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Entry
GCU68_12420 CDS
T06256
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K07730
putative transcriptional regulator
Organism
nas
Natronorubrum aibiense
Brite
KEGG Orthology (KO) [BR:
nas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nas03000
]
GCU68_12420
Transcription factors [BR:
nas03000
]
Prokaryotic type
Helix-turn-helix
Other families
GCU68_12420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7839
MarR_2
HTH_24
MarR
WHD_phage_rep
HTH_Crp_2
HVO_A0261_N
HTH_5
HTH_11
HTH_IclR
FilR1_N
HTH_20
HTH_45
DUF8462
Mnd1
TrmB
HTH_13
Fe_dep_repress
DUF7343
Rrf2
WHD_RNase_R
HVO_A0114
GntR
HTH_27
HTH_Cmi2_C
HTH_23
MotA_activ
AbiEi_4
SMC_ScpB
HTH_PafC
TetR_C_7
WHD_MCM
NirdL-like_HTH
DUF7342
HTH_10
HTH_AsnC-type
YdaS_toxin
Rio2_N
HTH_3
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
QFU83281
UniProt:
A0A5P9P538
LinkDB
All DBs
Position
complement(2515655..2516434)
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AA seq
259 aa
AA seq
DB search
MVDVLDNKRVATRFRILVQIAERQPAVSQGEIAEEVGVTSQAVSEYIRELVDDGLVEKEG
RSRYRVTNEGVDRLFRTADDIRRFADHVTGDILGAMSEAAYIATDDIDEGDTVTLSVKNG
LLHASPGDEGPATGVATTDAEAGTDVGVTSFEGVMDLDPGSVTVLQVPSVRSGGSRAIDS
DLVADRCDDADLVVAAGVEAVVACRQAGTEPTVAFATGDVAAEGAERGLEVTAVATTNEV
GRVTDTLRDADIAYEVLEG
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacgtcctcgataacaaacgggtcgcgacgcgctttcggattctcgtccagatc
gccgaacgtcagcccgctgtcagtcagggagagatcgccgaggaagtcggcgtgacgagt
caggccgtcagcgagtacatccgcgaactcgtcgacgacggactcgtcgaaaaggaaggt
cgttcacggtatcgtgtcacgaacgaaggcgtcgaccggctcttccggaccgccgacgac
atccgtcgattcgccgaccacgtcaccggcgacattctgggtgcgatgagcgaggccgcc
tacatcgcgaccgacgacatcgacgaaggcgacactgtcacgctctccgtgaaaaacggc
ttgcttcatgcgagccccggcgacgaggggccggcaactggcgtcgcgacgaccgacgcc
gaagccggcaccgacgtcggcgttacgagcttcgagggtgtcatggacttagatcccggc
tccgtcaccgtcttgcaggtcccctcagtccgctccggtggcagtcgagcgatcgattcg
gacctcgtcgccgaccgctgcgacgacgccgatctggtcgttgcagccggcgtcgaagcc
gtcgtggcctgtcgacaggccggcaccgagccgaccgtggcgttcgccaccggtgacgtc
gccgccgaaggcgccgaacggggcctcgaggtcacggcggtcgcgacgaccaacgaggtc
ggccgcgtcaccgacacgttgcgcgacgccgacatcgcctacgaagtgctcgaggggtga
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