Natronorubrum aibiense: GCU68_15915
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Entry
GCU68_15915 CDS
T06256
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nas
Natronorubrum aibiense
Pathway
nas04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GCU68_15915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nas03019
]
GCU68_15915
03009 Ribosome biogenesis [BR:
nas03009
]
GCU68_15915
04131 Membrane trafficking [BR:
nas04131
]
GCU68_15915
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nas04147
]
GCU68_15915
Messenger RNA biogenesis [BR:
nas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
GCU68_15915
Ribosome biogenesis [BR:
nas03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
GCU68_15915
Membrane trafficking [BR:
nas04131
]
SNARE
SNARE associated proteins
Others
GCU68_15915
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GCU68_15915
Exosome [BR:
nas04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GCU68_15915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
AAA_14
NPHP3_N
nSTAND3
IstB_IS21
RNA_helicase
AAA_28
Mg_chelatase
AAA_7
AAA_17
AAA_18
AAA_lid_PRS2_C
ABC_tran
DUF815
AAA_3
NB-ARC
Sigma54_activat
Parvo_NS1
ATPase
AAA_24
AAA_30
Vps4_C
TsaE
AAA_11
SLFN-g3_helicase
PhoH
NACHT
IPT
Motif
Other DBs
NCBI-ProteinID:
QFU83916
UniProt:
A0A5P9P743
LinkDB
All DBs
Position
3214703..3216931
Genome browser
AA seq
742 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGADTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEATKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVGRDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVVLITEDTDVELREEPISGFE
KTGGGITYEDIGGLQGEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLEARGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GREEILQIHTRGMPLSDDVNLSHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKRQDFRGALNEVEPSAMREVLVELPKISWDDVGGLHDAKEQVQESVEW
PLNNPERFSRLGVDPPSGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDALAPGRGGEVGSNVSERVVNQLLTELDGLEEMENV
MVIGATNRPDMIDPALLRSGRFDRLVMIGEPDVDGRERILDIHTEDTPLAADVTLREIAE
ITDGYVGSDLESIAREAAIEALREDHEADIVEMRHFRQAMENVRPTITDDILEYYEQIEE
EFKGGSSGPDPTGRRGSRIGFQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagttcaactggaggttgcgaaggcatacccgaacgactcgggtcgtggtatc
gcccgactcgatccggacacactgttgcatctgaagctgagtccgggcgacatcatcgaa
atcgaaggcgcagacaccaccgccgcgaaggtgtggcgcgccgaccggcaggactggaac
acggatacggtccgtatcgacggcttcactcggcagaacgccgacgtggggatcggcgag
cgggtgacgatccggaaagccgaagcgacgaaggcggacaaactcgtcctcgctccgccg
gaggaggcgtcggtccagttcggctccgacgcggctggcatggtcaaacgccagatcttg
aaacggccggtcgtcggccgcgatatcgttcccgtgatgagctcgacgaaccatccgttc
atgcgctcgccggggcaagcgattccgctcatcgccgtcgaaaccgaacccgaaggcgtc
gtcctcatcaccgaggacaccgacgtcgaactccgcgaggagccgatcagcggcttcgag
aagaccggtggcgggatcacctacgaggacatcggtggcctccaaggggagatccaacgc
gtgcgggagatggtcgaactcccgatgaaacacccacagatcttcaagaagctggggatc
gagccgccacagggtgtcttgctccacggcccgcccggcacggggaagacgctgctcgcc
aaagccgtcgccaacgagacctccgcgagtttcttctctatcgcggggccggagatcatc
tccaaatactacggcgagtccgaacagcaactccgagagatcttcgaggacgcgagcgag
gagtcgccgtcgatcatcttcatcgacgaactcgattcgatcgcaccgaaacgtgaagac
gtcaccggcgaggtcgagcgccgcgtcgtcgcccagctgctgacgatgatggacggcctc
gaggcccgcggccaggtcatcgtcatcgcggcgaccaaccgcgtcgattcggtcgacccc
gcgctgcgtcgaccgggccggttcgaccgcgagatcgaaatcggcgtgccagacgaggtg
ggtcgcgaggagatcctccagatccacacccgcgggatgccgctttcggacgacgtcaac
ctcagtcacctagccgacgaaacccacggcttcgttggcgccgacatcgagtcgctgacc
aaagaagccgcaatgaaggcgctgcgacggtacttaccggaaatcgacctcgacgaggag
gacatcccgccgagcctgatcgaccggatgatcgtcaagcgccaggacttccgtggcgca
ctcaacgaggtcgaaccctcggcgatgcgagaggtgctcgtcgagttgccgaagatttcc
tgggacgacgttggtggcctccacgacgccaaagagcaggtccaggagtccgtcgagtgg
ccgctgaacaaccccgagcggttcagccggttgggcgtcgacccgccatccggcgtcttg
ttgtacggtccgcccggaaccgggaagaccctcatggcgaaagccgtcgccaacgagact
aacgcgaacttcatctcggtgcgcggcccacagctgctcagcaagtgggtcggcgaatcg
gagaaagccatccgccagaccttccgcaaggcgcggcaggtctcgccgacggtgatcttc
ttcgacgaactcgacgcgctcgcacccggccgaggcggcgaggttggctcgaacgtctcc
gaacgggtcgtcaaccagctgctgaccgaactcgacgggttagaggagatggagaacgtg
atggtcatcggcgcgacgaaccggccggacatgatcgaccccgcactgctgcgctcgggt
cgattcgatcgactcgtcatgatcggcgaacccgacgtcgacggccgcgagcgcatcctc
gatatccacacggaggacacgccgctggccgccgacgtcacgctccgtgagatcgccgag
atcacggacggctacgtcggcagcgacctcgagtcgatcgcccgcgaggcggcgatcgag
gcgctgcgagaggatcacgaggccgacatcgtcgagatgcgtcacttccgacaggccatg
gagaacgtccgaccgacgatcaccgacgacatcctcgagtactacgagcagatcgaagag
gagttcaaaggtggctcgagcgggccggatccgacgggacgtcgcggcagccgaatcggc
ttccagtga
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