Natronorubrum aibiense: GCU68_20355
Help
Entry
GCU68_20355 CDS
T06256
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nas
Natronorubrum aibiense
Pathway
nas03022
Basal transcription factors
nas03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nas00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GCU68_20355
09124 Replication and repair
03420 Nucleotide excision repair
GCU68_20355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nas03021
]
GCU68_20355
03400 DNA repair and recombination proteins [BR:
nas03400
]
GCU68_20355
Enzymes [BR:
nas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCU68_20355
Transcription machinery [BR:
nas03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GCU68_20355
DNA repair and recombination proteins [BR:
nas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GCU68_20355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_30
MarR_2
AAA_22
AAA_25
TrmB
AAA
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QFU85047
UniProt:
A0A5P9PAV6
LinkDB
All DBs
Position
unnamed3:complement(1373..3268)
Genome browser
AA seq
631 aa
AA seq
DB search
MDHQPIGGNADDEPPADDLEGEQEPKELSLAEFHDACQQAGRPVLTAASVAQALGHPHEA
TSEALAELAERGDVERLSVETDPVVWYPSELEDLTDRERVVVFPKRREIIVDRPEQFTRA
QLSQFAHLADGNGEDGYRYVVRPEDIWQAPHDSFEGLARRMRQALGQRSNALEEWVKSQW
DRAHQFRLATHEDGYTVLEAKTPEVMGNVARQKLDEEHVHAPISETEDWVREGSEAAIKR
ILYEAGYPVQDHRDLEAGESLSIDLEVRLRDYQQTWVDRFAEAGEGVFVGPPGSGKTIAA
MGAMAHVGGETLVLVPSRDLARQWAESIAEHTSLEPHQIGQYHGGRKEVRPVTIATYQIA
GMDRHRSLFDDREWGLVVFDECQHVPSDVYRRSTHLQSRHRLGLSASPIREDDRQTEIFT
LVGPPIGTDWEALFEAGFVAEPELEIRYVPWGDDEQRNAYVSAEGREKYRIAAKNRGKVD
DVRYLLSAHPDSKAIVFVDYLEQGRDLAAALDVPFLSGETPHHERRRLLEEFRRNERDLL
VISRVGDEGIDLPTADLAIIASGLGGSRRQGTQRAGRTMRPAGGALVYVLATYGTREEDF
ARKQLQHLGRKGMTIREQTVERTDGSDSSDE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atcgaccaccagccgatcggcggaaacgccgacgacgagccgccagcggacgatctcgag
ggtgaacaggaaccgaaagaattgtcactcgccgagttccacgacgcgtgccagcaggca
ggacgtcctgtgctcaccgccgcgtccgtcgcacaggctcttgggcaccctcacgaggcg
accagcgaggcgctggcggagcttgcagagcgcggcgacgtcgagcgcctgtccgtcgaa
accgatcccgtcgtctggtatcccagcgaactcgaggacctgaccgaccgggagcgcgtg
gtcgtctttccgaaacggcgcgagatcatcgtcgaccgaccggagcagttcacgcgggcc
caactctcgcagttcgcccaccttgcggacggcaatggagaggacggctaccggtacgtc
gtccgcccggaggacatctggcaggcgccccacgacagttttgaaggtctggcccggagg
atgcgacaggcgctgggccagcgctcgaatgcgctcgaggagtgggtcaagagccaatgg
gatcgcgcccatcagttccgactagcgacccacgaggacggctacacggtgctcgaggcc
aaaacgcccgaagtgatggggaacgtcgcccgacagaaactcgacgaggaacacgtccac
gcgccgatctccgagaccgaagactgggtgcgggaagggtcggaagcagcgatcaagcgc
atcctctacgaagcgggctacccggttcaggaccaccgggacctcgaggccggcgagtcg
ctctcgatcgacctcgaggtacgcctgcgggactaccagcaaacgtgggtcgaccgcttc
gccgaggccggagagggtgtgttcgtcggcccgccgggcagtgggaagacgatcgcggcg
atgggtgcgatggcccacgtcggcggggaaacgctcgtgctcgtcccgagtcgggatctc
gcgcgccagtgggccgagtcgatcgcggagcacacctccctcgagccccatcagatcggg
cagtaccacgggggccgaaaggaggtccgcccggtcacgatcgcgacctaccagatcgcc
gggatggaccgccatcggtcgctgttcgacgaccgcgagtgggggctggtcgtcttcgac
gagtgccagcacgtcccctcggacgtctaccggcggagtacgcatctgcagtctcgtcat
cgactcgggctctccgccagcccgatccgggaggacgaccgccagaccgagatctttacg
ctcgtcggcccacccatcggcaccgactgggaggcgctgttcgaggccggcttcgtcgcc
gaaccggaactcgagatccgctacgtcccgtggggtgacgacgagcaacgaaacgcctac
gtctccgccgagggccgcgaaaagtaccggatcgccgcgaaaaaccgagggaaggtcgac
gacgtccgatatctgctctcggcccatcccgactcgaaagcgatcgtcttcgtcgactac
ctcgagcagggccgcgacctcgcagccgcactcgacgtacccttcctcagcggagagacg
ccacaccacgagcgacgccggttgctcgaggagttccgacgaaacgagcgcgacctgctg
gtcatctctcgtgtcggcgacgaggggatcgacctgccgacggctgatctcgcgatcatc
gcctcgggactcggcggctcgcgacggcagggaacccagcgagccggccgaacgatgcgg
ccggccggcggcgcgctcgtgtacgtgctcgcgacctacggcacgcgtgaggaggatttc
gctcggaaacagctccagcatctcggtcgcaaggggatgacgatccgcgagcagacggtc
gagaggaccgacggaagcgacagcagcgacgagtaa
DBGET
integrated database retrieval system
