KEGG   Natronorubrum aibiense: GCU68_21000
Entry
GCU68_21000       CDS       T06256                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
nas  Natronorubrum aibiense
Brite
KEGG Orthology (KO) [BR:nas00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nas03400]
    GCU68_21000
Enzymes [BR:nas01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GCU68_21000
    5.6.2.6  RNA 3'-5' helicase
     GCU68_21000
DNA repair and recombination proteins [BR:nas03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GCU68_21000
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII AAA_25 Zn_ribbon_8 HypA Zn_ribbon_PaaD
Other DBs
NCBI-ProteinID: QFU84999
UniProt: A0A5P9PA24
LinkDB
Position
unnamed3:132918..135752
AA seq 944 aa
MTDGDVAAFTHLGSTVRGALSERGFSRPTPPQQLAIPPLSAGQHTLVIAPTGSGKTETAM
LPVFDHLLDDPPEGFGALYVTPLRALNRDMRERLEWWGDYLDLAVDVRHGDTTQYQRGKQ
AENPPDVLVTTPETLQAMLTGERLREALRDVSHVVIDEVHELAASKRGAQLAVGLERLQD
LSGQIQRIGLSATVGDPAEVGQFLTGGRPCEIREIDVGSNVDVTVREPEITDEDERLAGE
LMTEADTASHVRLIRDLVAKHESTLIFVNTRQTAEALGSRFTELNLPIGVHHGSLSKEAR
IDVEDRFKAGELDGLLCTSSMELGIDVGRVDHVIQYKSPRQVTRLLQRIGRAGHRQDAVS
SGTIVTTRPDDTLEAVAIARRARDGEVEPTAIHDGSLDVVANQIPGFVQSRGSTPLREAY
ETVSRAYPFRDLPEETFREVVSELHRNRIVWFDEGEDRLETTGGTWQYVYANLSMIPDEE
TYEVHDIASSTQIGTLDERFVVNFAQPGEVFIQRGEMWRIAEIDDEEARVKVSPIEDPAG
EVPSWTGQEIPVPAAVAGEVGEIRAVAEPQLSAGADAGAVSRDLIQRYPADEETLTRACE
QLERQVAAEAPMPTADRLVLERQGRTLVLNAPFGHMINETLGRVLSSLLGQQAGSSVGLE
TDPYRIELEVPSSVATSDVLAVLEDTDPDHVEAIIELGLKRSDALAFRLAQVSAKFGALK
RWQHSGSGRLSSDRLLAALEDTPMYDEAIREVFHEDLDVDRASVVLERLQSGELELVTHR
GRTPVGQGGRSAGGKELLAPENADASVIKTVKERLQNDRIILLCTHCKEWKATTKVRRVA
DQPECPECGSTRIASLNPWADEVVQAVRAEEKDDEQASMTERAYRSASLVQSHGKQAVIA
MAARGVGPHNAARIINNLREDETEFYRDILSKEREYARTQSFWN
NT seq 2835 nt   +upstreamnt  +downstreamnt
atgactgacggggacgtcgcagcgtttacgcatctcgggtcgacggttcgcggggcgctc
tccgaacgcggtttctcgaggccgacgccgccgcaacagctggcgattccgccgttgtct
gccggccagcatacgctcgtgatcgcaccgacgggtagcggcaagaccgagacggcgatg
ttgcccgtcttcgatcacctgctggacgacccacccgaggggttcggcgcgctttacgtc
accccgctgcgggcactcaaccgcgacatgcgcgaacgcctcgagtggtggggcgactat
ctcgacctcgcggtcgacgttcgccacggtgatacgacccagtaccagcgcgggaagcaa
gcggagaacccaccggacgtgctggtgacgacgcccgaaaccctgcaggcgatgctcacc
ggcgagcggctgcgggaggccctccgagacgtttcccacgtcgtgatcgacgaggttcac
gaactcgcggcgtcgaaacgcggcgcccaactcgcggttggcctcgagcgactacaggac
ctctcagggcaaatccagcgaatcggcttgtcggcgacggtcggcgatcctgccgaggtc
gggcagttcctgaccggcggccgaccctgtgagatccgagagatcgacgtcggaagcaac
gtcgacgtcaccgttcgcgaacccgagatcaccgacgaagacgaacggctggcaggcgaa
ctgatgaccgaagccgacacggccagccacgttcgcctgattcgggacctcgtcgccaaa
cacgagtcgacactgatcttcgtcaacacgcgacagacggccgaggcgctgggctcgcgg
ttcaccgaactcaaccttcccatcggcgtccaccacggctcgctctcgaaggaggcccgg
atcgacgtcgaggatcggttcaaagccggcgaactggacggcctgctctgtacgtcctcg
atggaattggggatcgacgtcggccgcgtcgatcacgtgatccagtacaaaagcccccgg
caggtgacgcgactgctacagcggatcgggcgtgcgggccaccgccaagacgcggtctcg
agcggtacgatcgtcacgacccggcccgacgacacgctcgaggcggtcgcgatcgcccgc
cgagcgcgcgacggggaggtcgaaccgacggcgatccacgacgggagtctcgatgtggtc
gcaaaccagatcccgggcttcgttcagagccgtggctcgacaccgctacgcgaggcctac
gagaccgtctcgcgcgcgtatccgttccgcgaccttcccgaggagacgttccgcgaggtc
gtctcggaactgcatcgcaaccgaatcgtctggttcgacgagggtgaggatcgcctcgag
acgaccggcggcacctggcagtacgtctacgcgaacctctcgatgatccccgacgaggag
acctacgaggtccacgacatcgcctcgagcactcagatcgggacgttagacgagcggttc
gtggtcaacttcgcccagcccggcgaggtgttcatccagcgcggcgagatgtggcgcatc
gccgagatcgacgacgaggaggcgcgagtgaaggtcagcccgatcgaagaccccgcgggt
gaggtgccgtcgtggaccggtcaggagattcccgttcccgctgcggttgccggtgaggtc
ggcgagatccgagccgtcgccgaaccacagctgtcggctggtgcggatgctggggccgtt
tcgcgagacctcatccagcgctatccggctgacgaggagacgcttacgcgtgcctgcgaa
caactcgagcgtcaggtcgcggccgaggccccgatgccgacggcggatcggctcgtcctc
gagcggcagggtcgaacgctcgtcttgaacgcaccgtttggccacatgatcaacgaaacg
ctcggtcgcgtgctctcctcgttgctcggccagcaggccggctcgtccgtgggcctcgag
acggacccctaccggatcgaactcgaggtgccgagttcggtggcgaccagcgatgtgctg
gcggtgctcgaggataccgatcccgaccacgtcgaggcgatcatcgaactcggcctcaag
cgctcggatgcactcgccttccggctcgcacaggtctctgccaagttcggcgcgctcaaa
cgctggcagcacagcggttccggacgactctcgagcgaccggctgttggcagcgctcgag
gacacgccgatgtacgacgaggcgatccgggaggtgttccacgaggatctggacgtcgac
cgggcgagtgtggtcctcgagcggctccagtcgggcgaactggaactcgttacccaccga
gggcggacgccggttggacagggcggccgctcggccggtggaaaggagttgctagcaccc
gagaacgccgacgcgagcgtgatcaagacggtcaaagagcgcctgcagaacgaccgcatc
atcctgctctgtacccactgcaaggagtggaaagccacgacgaaagtcaggcgtgtcgcc
gaccagcccgagtgtcccgagtgtggctcgacgcgaatcgcgtcgctgaacccgtgggcc
gacgaggtcgtgcaggcggtccgcgccgaggagaaagacgacgaacaggcgtcgatgacc
gaacgcgcctatcggagcgccagcctcgttcagagccacggcaaacaggccgtgatcgcg
atggctgcccgcggcgtcgggccacacaacgccgcccggatcatcaacaaccttcgggaa
gacgaaaccgagttctatcgtgacatcctctcgaaagaacgtgagtacgcgcgcacgcaa
tcgttctggaattag

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