Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112390600
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Entry
112390600 CDS
T08872
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nasi03000
]
112390600 (SOX6)
Transcription factors [BR:
nasi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112390600 (SOX6)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
112390600
NCBI-ProteinID:
XP_024587348
UniProt:
A0A341ACQ5
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MCTGARRMSSKQATSPFACAADGEEAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHS
EELPTLVNTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMT
SVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSEL
LGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQ
QEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPP
GITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMPSTPQPPNT
AGAVSPTGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQSLFPASKTS
PVNLPNKSSIPSPIGGSLGRGSSLGKWKGQHQEETYELDILSSLNSPALFGDQDTVMKAI
QEARKMREQIQREQQQQQPHGVDGKLSTMNNMGLNNCRNEKERTRFENLGPQLTGKSSED
GKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSEPH
IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKI
HLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTG
VVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDE
MEMYDDYEDDPKSDYSSENEAPEAVSAN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtgtacaggtgccagaagaatgtcttccaagcaagccacctctccatttgcctgtgca
gctgatggagaggaagcaatgacccaagatttgacctcaagggaaaaggaagagggcagt
gatcaacatgtggcctcccatctgcctctgcaccccataatgcacaacaaacctcactct
gaggagctaccaacacttgtcaataccattcaacaggatgctgactgggacagtgttctg
tcgtctcagcaaagaatggagtcagagaataataagttatgttccctatattccttccga
aatacctctacctcaccacataagcctgacgaagggagtcgggaccgcgagataatgacc
agtgttacttttggaaccccagaacgccgcaaagggagccttgccgatgtggtggacaca
ctgaaacagaagaagcttgaggaaatgactcggactgaacaagaggattcctcctgcatg
gaaaaactactttcgaaagattggaaggaaaaaatggaaagattaaataccagtgaactt
ctcggagaaattaaaggtacacctgagagcctggcagaaaaagaacggcagctctctacc
atgattacccagctgatcagtttacgggagcagctcctcgcagcgcatgatgaacagaaa
aaactggcagcctcacaaattgagaaacaacggcagcaaatggaccttgctcgccaacag
caagaacagattgcaagacaacagcagcaacttctgcaacagcagcacaaaattaatctc
ctgcagcaacagatccaggttcagggtcacatgcctccgctcatgatcccaatttttcca
catgaccagcggaccctggcagcagctgctgctgcccaacagggattcctcttcccccct
ggaataacgtacaaaccaggtgataactaccctgtacagttcattccatcaacaatggca
gctgctgctgcttctggactcagccctttacagctccagcagctctatgccgctcagctg
gccagcatgcaggtgtcacctggagcaaagatgccatcaactccacagccaccaaacaca
gcaggggcagtctcacctactgggataaaaaatgaaaagagagggaccagccctgtaact
caagttaaggatgaagcagcagcacagccgctgaatctctcatcccgacccaagacagct
gagcctgtaaagtctccaacatctcccacccaaagcctctttccagccagcaaaaccagc
cctgtcaatctgcctaacaaaagcagcatccccagccccattggaggaagcttgggaaga
ggatcctctttaggtaaatggaaaggtcaacaccaggaagagacttacgaattagatatc
ctgtccagtctcaactcccctgccctgtttggggatcaggatacagtgatgaaagctatt
caggaggctcggaagatgcgcgaacagatccagcgggagcaacagcagcaacagccgcat
ggtgttgatgggaaactgtctaccatgaataatatggggctgaacaactgcaggaatgaa
aaggaaagaacacgctttgaaaatttggggccccagttaacaggaaagtcaagtgaagat
ggaaagctgggcccaggtgtcatcgatcttactcggccagaagatgcagagggaagtaaa
gcaatgaatggctctgcagctaaactacagcagtattattgttggccaacaggaggtgcc
actgtggctgaagcacgagtctacagggatgcccgtggccgggccagcagtgagccacac
atcaagcgaccaatgaatgcattcatggtttgggccaaggatgagaggaggaaaatcctt
caggcctttcctgacatgcataactccaacattagcaaaatcttagggtctcgctggaaa
tccatgtccaaccaagagaagcaaccttattatgaggagcaggcccggctaagcaagatc
cacttagagaagtacccaaactataaatacaaacctcgaccgaaacgcacctgcattgtt
gatggcaaaaagctccggattggggagtataagcaactgatgagatctcggagacaggag
atgaggcagttctttaccgtggggcagcagcctcagattccaatcaccacaggaacaggt
gttgtgtatcctggtgctattactatggcaactaccacaccatcacctcagatgacatct
gactgctctagcacctccgccagtccagagcccagcctcccggtcatccagagcacttat
ggtatgaagacagacggcggaagcctagctggaaatgaaatgattaatggagaggatgag
atggaaatgtatgacgactatgaagatgatcccaaatcagactatagcagtgaaaatgaa
gccccggaagctgtcagtgccaactga
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