Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112390682
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Entry
112390682 CDS
T08872
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03030
DNA replication
nasi03410
Base excision repair
nasi03420
Nucleotide excision repair
nasi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112390682 (RFC1)
03410 Base excision repair
112390682 (RFC1)
03420 Nucleotide excision repair
112390682 (RFC1)
03430 Mismatch repair
112390682 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nasi03032
]
112390682 (RFC1)
03400 DNA repair and recombination proteins [BR:
nasi03400
]
112390682 (RFC1)
DNA replication proteins [BR:
nasi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
112390682 (RFC1)
DNA repair and recombination proteins [BR:
nasi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
112390682 (RFC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
Rad17
AAA_22
AAA_14
BRCT_2
AAA_5
RuvB_N
AAA_33
AAA_7
AAA_17
AAA_16
AAA_30
AAA_18
nSTAND3
Zeta_toxin
RNA_helicase
NPHP3_N
NTPase_1
AAA_19
AAA_28
Motif
Other DBs
NCBI-GeneID:
112390682
NCBI-ProteinID:
XP_024587491
UniProt:
A0A341A9Z6
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
MDIRKFFGVIPSGKKVVSETAKKNEKTKSAEETRKAKKGIKEIKVNRSCKEDDFKQKQPN
KKKRIIYDSDSESEETVQVKNSKKRPEKLPLSSKPAKIRHQDPVTYISETDEEDDFVCKK
AASKSKENGGSPNSYLGASNMKKNEENTKTLNTKNKPLSPMKLTPTSVLDYFGTASVQRS
AKKMVASKRKEPSQNADDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPK
TKKAQKDPGERETFSSVQASLCKAEKPKYPHKEQFSDDRKNCSPKKQTKCGSSKESQQHS
RSSTHKIGETSSPKTSSKLAPLKKKEESSNKETEPMASKRKENAIELKETRTPKKIKSSP
AKKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESI
ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRT
MPGKKSKYEIAAEAEMKKEKSKLERTPQKNDQGKRKISPTKKESESKKCRLTPKKQSSIK
SIKKETSMFQRGLDFTEQVAEETNGDSWARNLADDSSENKVENLLWVDKYKPSSLKTIIG
QQGDQSCANKLLRWLQNWHKSPSEDKKHAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTA
SLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKGFYSSGAADSVGTKHALIMDE
VDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIK
GAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSLRAK
KDIKLGPFDVARKVFVTGEETAHMSLVDKLDLFFHDYSIAPLFVQENYIHVKPVAAGGDM
KKHLTLLSRAADSISDGDLVDRQIRNKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPS
WLGKHSSMGKHDRIVQDLALHMSLRTYSSKRTVNVDYLSHIRDALVQPLTSQGIEGVQDV
VALMDAYYLMKEDFENIMEISSWGDRPSPFSKLDPKVKAAFTRAYNKEVHLIPYSLQAVK
THRHSTGPALDAEYNEELNEDDSQSDEKDQDTLETDAMIKKKTKSSKTSKSEKESRKGKG
KSSKK
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgaaaattctttggggttataccaagtggaaagaaagttgtaagtgaaaca
gcaaagaagaatgagaaaacgaagtctgctgaagaaaccagaaaagcgaagaaaggaata
aaggaaatcaaggtaaatcgttcttgtaaagaagatgacttcaaacagaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagaatcagaggagacagtgcaggtaaaa
aactccaaaaagcgaccagaaaaattgccactgtcttctaaacctgctaaaattcgacac
caggatcctgttacatacatttcagaaacagatgaagaagatgactttgtgtgtaagaag
gcagcctctaaatcaaaagagaatggaggatctccaaatagttatcttggagcatcaaac
atgaaaaagaatgaagaaaacactaagacactaaacactaagaataagcctttgtcacca
atgaagcttacccccacatcagtgcttgattattttggaactgcaagtgtccaaagatcg
gctaagaagatggtggcaagcaaaagaaaagagccttcacagaatgcagatgattccaga
ttaaatgatgaagccatcgccaagcaattgcaacttgatgaagatgcagagctagagaga
caactgcatgaagatgaagagtttgccagaacattagccatgttggatgaagaacccaag
accaaaaaggctcaaaaggacccaggagagagagagacgttttcatctgtgcaagccagt
ttatgtaaagcagaaaaacctaaatatcctcataaagaacaattttcagatgacaggaag
aactgcagtcctaagaagcaaactaaatgtggaagttcaaaagaatctcagcaacattcc
aggtcatccactcataaaataggagaaacttcttctccaaaaaccagttccaagctggca
ccactgaaaaaaaaagaagaaagttctaataaagaaacagagcctatggcctcaaaaaga
aaagaaaatgccattgagttgaaagagacaagaactcctaagaaaatcaaaagttctcca
gctaaaaaagagtctgtaagtcctgaagattctgaaaagagacgaactaattatcaagct
tatcgaagctacttaaatcgagaaggtcccaaagctctgggctccaaagagataccaaag
ggagctgaaaattgcttggaaggccttacgtttgtaatcacaggagtgctggagtcaatt
gaacgagatgaggccaagtctctaattgagcgttatgggggaaaagtaacaggaaatgtc
agcaagaaaacaaactaccttgtcatgggtcgtgatagtggtcagtccaagagtgataag
gcagcagccttgggaacaaaaattattgatgaagatggcctattgaatctgattcgaact
atgccaggcaagaagtccaagtatgaaatagcagctgaagctgagatgaagaaagaaaaa
tccaaattggaaagaacaccccaaaaaaatgaccaaggaaaaagaaaaattagtccaact
aagaaggaatcagaatctaaaaagtgcagactgactcccaaaaagcaaagctctataaag
tcaataaaaaaggaaacaagtatgtttcagagaggcctggacttcacggagcaggtggct
gaggaaacaaatggtgacagctgggctaggaatttggctgatgacagcagtgaaaacaaa
gtggagaatttgctctgggtggataaatataagccatcctcgctcaagaccataattgga
cagcaaggtgaccagagctgtgccaacaaactcctacgctggctccaaaactggcacaag
agtccatccgaagataagaaacacgcaaagtttggtaaatttgctggcaaagatgatggc
tccagttttaaagctgcattgctctcaggccctcccggtgttggcaaaacaaccacagct
tctctggtttgtcaggaactgggatatagctacgtggaactgaatgcaagtgacactcgg
agtaagaacagtttgaaggaaattgttgctgaatcgctgaataataccagcatcaaaggc
ttttattcaagtggagcagccgattcagtaggcacgaaacatgctctcatcatggatgaa
gtagatggcatggccggcaatgaggacaggggaggaattcaggaattaattggcctgata
aaacatacaaaaattcccattatttgtatgtgcaatgatagaaatcatcccaagattcga
tctttggttcattattgttttgatcttcgttttcaaagacctcgggttgaacaaattaag
ggtgctatgatgtctattgcatttaaagagggtttaaagattccccctccagctatgaat
gaaataattttgggagccaatcaagatatcagacaggttttacacaatctgagtatgtgg
tgtgcacgaagtaaagcactaacctatgaccaggctaaggctgattctcttagagccaaa
aaggatatcaaattgggcccatttgatgttgcccggaaagtgtttgtaactggagaggag
actgctcatatgtcacttgtggacaaattagatctcttttttcatgattattcaatagca
cccctctttgtccaggagaactacatacatgtgaagcctgtagccgcagggggtgacatg
aaaaagcacttgacgcttttaagcagagcagcagacagcatatctgatggtgacctagtg
gaccgtcagatccggaataagcaaaactggagtcttctgcccacacaggccatttatgcc
agtgttcttcctggagagttaatgaggggatacatgacccagtttcctaccttcccaagt
tggttggggaagcactcatctatgggcaaacatgatcgtattgttcaggacctagctttg
catatgagtctcagaacttactccagcaaaaggactgtaaacgtggattatctgtcacat
ataagggatgcacttgtacagcccttgacctcacaagggatagaaggagtacaggatgtt
gttgctcttatggatgcgtattatttgatgaaagaagactttgagaatatcatggaaatt
agcagctggggagacagacctagtcccttctccaagctggatcccaaggtgaaagcagcc
ttcacaagagcttacaataaggaagtccaccttattccgtattcactccaggcagtaaag
acacacagacacagcacaggcccagcgctggatgctgagtacaatgaagagttaaatgaa
gatgactctcaatctgatgagaaggaccaggacactttggaaactgatgctatgatcaag
aaaaagacaaaatcttcaaagacttcaaaatcagaaaaagagtccagaaaaggaaaagga
aaaagttcaaagaaataa
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integrated database retrieval system
