Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112390814
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Entry
112390814 CDS
T08872
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nasi03041
]
112390814 (DDX43)
Enzymes [BR:
nasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112390814 (DDX43)
Spliceosome [BR:
nasi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
112390814 (DDX43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
MOEP19
KH_2
SNF2-rel_dom
KH-I_KHDC4-BBP
MobL
KH_5
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
112390814
NCBI-ProteinID:
XP_024587665
UniProt:
A0A341AAJ5
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MSRPEAGANASSWVVASRRGAALPRAPERSPEQEPSQGGRGGQKTGGGGGWRGHSGVQQP
VGAGFQEPPLSFSLKNDWVGAVIGRGGSKIKEIQSSTYTKIQIIKGYPEAEVRIFGTKAM
QSKAKTAIDNLVQKQEDYKTEPKVDVAVVQTSDGKDARKDVSGNQKSVDWDKCRENILKW
SQKKWAGLPPIKKNFYVESETTSSMSQDQADNWRRENYNIMCDDLKGGEKRPLPNPIGNF
EDAFHCYPEVMRSLQKAGFQRPTPIQSQAWPIILQGVDLIGVAQTGTGKTLTYLMPGFIH
IDSQPLARNGPGMLILTPTRELALQVEAECRKYSYKGLKSVCIYGGGDRDGQIKDLAEGV
DIIIATPGRLHDLQMNNFVHLKSVTYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMT
SATWPCAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIVTTEDEKQSHIQTFIESLSP
KDKVIIFVSRKAVADHLASDLSIRHISVESLHGNREQSDRETALKNFRTGEVRILIATDL
ASRGLDVHDVTHIYNYDFPRNIEEYVHRVGRTGRAGRTGISVTLITRNDWKIAGELINIL
ERANQSVPEDLVVMAERYKANKLKKEMESKWERPQGKPKMFYY
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggccggaagccggcgccaacgcctcctcctgggtcgttgcttctcggcggggc
gcggcgctgcctcgggctccggaaaggagcccggagcaggagccgagccaaggcggtcgc
ggaggccagaagaccggcggaggtggcggctggaggggccactccggcgtccagcagccc
gtgggcgctggtttccaggagccgccgctctccttcagcctgaagaacgactgggtgggc
gcagtgatcgggcgtggtgggtcaaaaataaaagagatccagagctcaacatacaccaaa
atacagataataaaagggtaccctgaagcggaagtaagaatttttggcaccaaggcaatg
cagagcaaagcgaaaacagcgatagataatcttgttcaaaaacaagaagactacaaaacg
gaacccaaagttgatgttgctgttgtccaaacttcggatggaaaagatgcaaggaaagat
gtttcaggaaatcagaaatcggttgattgggataagtgccgagaaaatattttgaaatgg
agccaaaaaaagtgggcaggtttacctccaattaagaaaaacttttacgtggagtcagaa
acaacaagttcaatgtcacaagaccaagcagacaattggaggagggaaaattataatata
atgtgtgatgacttgaaaggtggtgagaaacgtcctcttcccaaccctattggtaatttt
gaggatgcatttcactgttatcctgaagttatgagaagccttcaaaaggcaggttttcaa
aggccaacaccaattcagtcacaggcatggccaatcattctacaaggagtagatcttata
ggagtagctcagactggaacggggaagacattgacctacttaatgcctggatttattcat
attgactcacaacctctagccaggaatgggccgggcatgttaatcctcaccccgactcga
gaactagctctgcaagtggaagccgagtgccgtaaatattcatataaaggtcttaaaagt
gtttgtatatatggtggtggcgatagagatggacaaataaaagacttagcggaaggtgtc
gatatcattattgccactcccggaagactccacgatctacaaatgaataactttgtgcac
ctgaagagcgtaacctacctggtattagatgaagctgacaagatgctggatatgggattt
gaaccccagataatgaagattttattagatgtacgcccagacaggcagacagttatgaca
agtgcaacgtggccatgtgctgtccgtagactcgcacaatcttatttgaaagagcccatg
attgtgtatgttggtactttggatctagttgctgtaagtaccgtgaaacaaaatataatt
gtcaccacagaagacgagaaacaatcgcatatccaaactttcatcgagagcctgtctccc
aaagacaaagtcataatatttgttagccggaaagctgtggctgatcatttagcaagtgac
ctgagtatccggcatatatcagtagagtctctgcatggcaacagagaacagagtgatcga
gagacagcattaaaaaactttagaacaggggaagtgcgaatactgattgctaccgattta
gcatctcgtggtctcgatgtccatgatgtcacacacatctataattatgattttccccgg
aacatcgaagaatatgtgcacagagtagggcgcaccgggagagcagggaggaccgggata
tctgttacccttatcactagaaatgattggaagattgccggtgaattaattaatattctg
gaaagagcaaatcagagtgtcccagaggatcttgtggtgatggctgagagatataaagca
aataaactgaaaaaagaaatggaaagtaaatgggaaagaccccaaggaaaacccaagatg
ttttattattaa
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