Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112391208
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Entry
112391208 CDS
T08872
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04140
Autophagy - animal
nasi04148
Efferocytosis
nasi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112391208 (VPS18)
04148 Efferocytosis
112391208 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112391208 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nasi04131
]
112391208 (VPS18)
Membrane trafficking [BR:
nasi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
112391208 (VPS18)
Hops complex
112391208 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_Vps41
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
112391208
NCBI-ProteinID:
XP_024588267
UniProt:
A0A341AGL1
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTRQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHMELGRKDDAKVHKMFLDPTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPEGRGFVIATTRQRLFQFIGRAAEGAE
AQGFSGLFAAYTDHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGSLDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAHTERAVFRYQVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQHRYLESARCYALTQSYFEEIALKFLEAHQEEALAEFLQRKLASL
KPAERTQATLLTAWLTELYLSRLGALQGDPEALNLYRETRERFRAFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETD
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHHACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAALPPAKGSARAKEAEGGAATGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatcctagatgaatacgaggactccctctcccgctcggccgtcttgcagccc
ggctgccccagcgtcggcatcccccactcgggatatgtgaatgcccagctagagaaggaa
gtgcccattttcacgaggcagcgcattgactttaccccttctgagcgtatcaccagtctt
gtcgtctcctgcaatcagctctgcatgagcctgggcaaggatacactactccgcattgac
ttaggcaaagcaaatgaacccaaccacatggagctggggcgcaaggatgatgccaaagtt
cacaagatgttcctggaccctactggctctcacctgctgatcgctctgagcagcactgag
gtcctctacgtgaaccgtaatggacagaaagttcggcccctggcacgctggaaggggcag
ctggtggagagtgtgggctggaacaaggccctgggtactgagagcagcacaggccccatc
ctggtcggcactgcccaaggccaaatctttgaagcagagctctcggccagcgagggtggg
cttttcggccctgccccggatctctacttccgtccgttgtacgtgctaaacgaagaaggg
ggcccagcacctgtgtgctccctcgaggcggagcggggccctgaagggcgtgggtttgtc
atcgccaccactcggcagcgcctcttccagttcataggccgagcagccgagggagctgag
gcccagggcttctcagggctctttgctgcctacactgaccacccaccaccattccgtgag
ttccccagcagtctgggctacagtgagttggccttctacacccccaagttgcgctctgca
ccccgggctttcgcctggatgatgggggatggcgtgttgtatggctcgttggactgtggg
cgtcccgactccctgctgagtgaggagcgggtatgggagtacccagagggggtgggtcct
ggggccagcccacccctggccatcgtcctgacccagttccacttcctgctgctgctggcg
gaccgggtggaggcggtgtgcacgctgacggggcaggtggtgctgcgggaccacttcctg
gagaagtttgggccgctgaagcacatggtgaaggactcctccacaggccacctgtgggcc
cataccgagcgggccgtcttccgctaccaggtacagcgggaggcccgggatgtctggcgc
acctacctggacatgaaccgcttcgacctggccaaagagtattgccgagagcggcctgac
tgcctggacacggtcctggcccgggaggccgacttctgcttccgccagcatcgttacctg
gagagtgcccgctgctacgccctgactcagagctactttgaggagattgccctcaagttc
ttggaggcccaccaggaggaggcgctggccgagttcctgcagcgaaaactggccagtttg
aagcctgctgagcgcacccaggccacactgcttaccgcctggctgacggagctctacctg
agccgactcggggccctgcagggtgaccctgaggccctgaacctctaccgggaaacccgg
gagcgtttccgcgccttcctaagcagcccccgccacaaggagtggctcttcgccagccgg
gcctccatccacgagctgctcgccagccacggggacacagagcacatggtatacttcgct
gtgatcatgcaggactacgagcgcgtggtggcataccactgccagcatgaggcctacgag
gaggccctggctgtgctggcccgccaccgtgacccccagctcttctacaagttctcaccc
atccttatccgtcacatccctcgccagctggtggacgcctggattgagctgggcagccgg
ctggatgcccggcagctcatccctgccctggtgaactatagccagggtggcgaggcccag
caggtgagccaggccatccgctacatggagttctgcgtgaatgtgctgggcgagactgat
caggccattcacaattacctgctgtcgctctatgcccgaggccagccagcctcgctgctg
gcctacctcgagcaggccggggccagcccgcaccgggtacattatgacctcaagtacgcg
ctgcggctctgtgctgagcatggccaccaccatgcttgcgtccatgtctacaaggtcctg
gagctgtatgaggaggctgtggacctggccctgcaggtggacgtggacctggccaagcag
tgtgctgacctgcccgaggaagatgaggagctgcgcaagaagctgtggctgaagattgct
cggcatgtggtgcaggaggaggaggatgtgcagacggccatggcctgcctggccagctgc
cccctgctcaagatcgaggatgtgctgcctttcttccctgacttcgtcaccatcgaccac
ttcaaggaggcgatctgcagctcgctgaaggcttacaaccaccacatccaagagctgcag
cgggagatggaagaggccacggccagcgcccagcgcatccggcgagacctgcaggagctg
cggggccgctatggcaccgtggagccccaggacaaatgtgccacctgcgacttccccctg
ctcaaccgccctttttacctcttcctctgtggccacatgtttcacgctgactgcctgctg
caggccgtgcggcctggcctgccagcctacaagcaggctcggctcgaggagctacagcga
aagctgggcgccgctctaccccctgccaagggctctgcccgggctaaggaggccgagggg
ggcgctgccaccgggggtcccagccgggaacagctcaaggctgacctggatgaactagtg
gctgctgagtgcgtgtactgtggggagctgatgatccgctctattgaccggcccttcatc
gaccctcagcgctacgaggaggagcacctcagttggttgtag
DBGET
integrated database retrieval system
