Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112391241
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Entry
112391241 CDS
T08872
Symbol
RTF1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nasi03021
]
112391241 (RTF1)
Transcription machinery [BR:
nasi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
112391241 (RTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
112391241
NCBI-ProteinID:
XP_024588332
UniProt:
A0A341AGS4
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MRGRLCVGRAAAAAAAVAVPLAGGQEGSPGGVRRGSRGTTMVKKRKGRVVIDSDTEDSGS
DENLDQELLSLAKRKRSDSEEKEPPVSQPAASSDSETSNSDDEWTFGSNKNKKKGKARKI
EKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHD
GYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKKRFEIRKKLKTAKKKEKKEKK
KKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELL
AKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELN
RVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGVVETAKVYQLGGT
RTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIK
EALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLN
ELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRRQCK
PTIVSNSRDPAVQAAILAQLNAKYGSGVLPDAPKEMSKGQGKDKDLNSKSASDLSEDLFK
VHDFDVKIDLQVPSSESKALAITSKAPPAKDGAPRRSLNLEDYKKRRGLI
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcgcctttgtgtgggtcgagcagcagcggcggcggcggcagtggcggtccca
ctggcaggcgggcaagaggggagtccgggcggcgtccggcgtgggagccgggggaccacg
atggtaaagaagcggaaaggccgcgttgtgatcgactcagacacggaagacagcggcagc
gacgagaacctggatcaggagctcttgtccctggcaaagcggaaacgaagtgactctgaa
gagaaggagccgcctgttagtcagcctgcagcctcctcagactcggagacgtctaacagt
gatgatgagtggacttttgggagcaataaaaataagaagaaaggaaaagccagaaaaata
gagaagaaaggaaccatgaagaaacaggccaataaaactgcttcttcaggcagttcggac
aaagacagttcagctgagagctcagcccctgaagaaggtgaagtgtcagattctgacagc
aacagctcctcctccagttcagattcagactcttcctcagaagatgaggaattccatgat
ggctatggagaagacctcatgggagatgaggaagacagggcccgtctggaacagatgaca
gaaaaggagagagagcaagaactgttcaaccgcatagagaagagggaggtgttaaaaaaa
agatttgaaatcaggaaaaaactgaaaacagccaaaaagaaagaaaagaaagaaaaaaag
aaaaagcaagaagaggagcaggaaaagaagaaactgacacagattcaagaatctcaggta
acatcccataacaaggaacgacgttccaaacgggatgagaaactagataagaaatctcaa
gccatggaggagctaaaagcagagcgagaaaaacggaagaacagaacagctgagctcctc
gccaagaaacagccattaaaaaccagtgaggtgtactctgacgatgaggaggaggaggaa
gatgacaagtccagtgaaaagtcagaccgctcatcccgaacatcgtcatctgatgaagaa
gaggagaaagaagagatccctccaaaatcacaaccggtctccttaccagaggaactgaat
cgggttcgattatcacggcataagctggaacgttggtgtcacatgcccttctttgctaaa
actgtcacaggatgttttgtacggattggcattggaaaccacaacagcaaaccagtttac
cgggtggctgaaatcacgggtgtagtggaaaccgccaaagtttaccagcttggtggcacc
agaacaaacaaagggctacagctacggcacggcagtgaccagcgagtgttccgcctagag
tttgtctcaaaccaggagtttactgaaagcgaattcatgaagtggaaagaagcgatgttc
tctgctggcatgcagttgcccactctagatgaaatcaataagaaggaattatctattaaa
gaagctcttaattataaattcaatgaccaggacattgaagagattgtaaaagagaaagaa
agattcaggaaagctccacccaactatgctatgaagaaaacgcagctcctaaaggaaaag
gccatggctgaggacctgggggatcaggacaaggccaaacaaatccaagaccagctgaac
gagctggaggaacgagcagaggccctggaccgccagcggaccaagaacatatctgcgatc
agttacatcaaccagcggaaccgggagtggaacattgtggagtctgagaaggcccttgtg
gctgaaagtcacaacatgaaaaaccaacagatggatccttttaccaggcgacagtgtaaa
cctaccatcgtttctaattccagagacccggctgttcaagctgccatattggcccagctg
aacgcaaaatacggttctggagtgttaccagatgctccaaaggaaatgagcaagggtcag
ggaaaggataaagatttgaattctaagtcagccagtgacctctcagaagacttgttcaaa
gtacatgatttcgacgtgaagatcgatttacaagttcccagctcagagtcaaaggctttg
gccatcacctccaaggctccgccagccaaggatggagctccaaggagatctctgaacttg
gaagactacaaaaaacgacgagggcttatttga
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