Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112391898
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Entry
112391898 CDS
T08872
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nasi03000
]
112391898 (SOX5)
Transcription factors [BR:
nasi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112391898 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
112391898
NCBI-ProteinID:
XP_024589212
UniProt:
A0A341AJC7
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHEVDGN
KVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELI
KNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQ
LLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQL
PPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGP
LQLQQLYAAQLAAMQVSPGGKLPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPL
NLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPASLASPSARVSTIGYLNDHDA
VTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRAEKEKTTLESLTQQLAVKQNEE
GKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKIL
QAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLV
DGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEH
SSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDINGEIYDEYEEEEDDPDVDYGSDSE
NHIAGQAN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcttactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaa
gaagaggagagtgacgggctcccagcctttcaccttcccttgcatgaagttgatggcaat
aaagttatgtcttcatttgccccacacaactcatctacctcacctcagaaggcagaagaa
ggtgggcgacagagtggcgagtccttgtctagtacagccctggggactcctgagcgacgc
aaaggcagcttagctgatgttgttgacaccttgaagcagaggaagatggaagagctcatc
aaaaatgagccagaagaaacccccagtattgaaaagctactatcaaaggactggaaagac
aagcttcttgcaatgggatcagggaactttggtgaaataaaagggactcccgaaagcctc
gctgagaaggagagacagctcatggggatgatcaatcagctaaccagtctgcgagagcag
ctgttggctgcccatgatgagcagaaaaaactggctgcatctcagatcgagaaacagcgg
cagcaaatggagctggccaagcagcagcaagaacagattgcaagacaacagcagcagctt
ctgcagcaacaacacaaaatcaatttgcttcagcaacagatccaggttcaaggtcaactg
ccgccattaatgattcctgtattccctcccgatcaacggacactggctgcagctgcccag
caaggattcctccttcctccaggcttcagctataaggctggatgtagtgacccttaccct
gtacagctgatcccaactaccatggcagctgctgctgcagcaacaccaggcttaggccca
ctccaactgcagcagttatatgctgcccagctagctgcaatgcaggtatctccaggagga
aagctcccaggcataccccaaggcaaccttggtgctgctgtatctcctaccagcattcac
acagacaagagcacaaacagcccaccacccaaaagcaaggatgaagtggcacagccactg
aacctatcagctaaacccaagacctctgatggcaaatcacccacatcacccacctctccc
catatgccagctctgagaataaacagtggggcaggccccctcaaagcctctgtcccagca
tcattagctagtccttcagccagagttagcacaataggttatttaaatgaccatgatgct
gtcaccaaggcgatccaagaagctcggcagatgaaggagcagcttcggcgggaacaacag
gtgcttgatgggaaggtagctgttgtgaatagtctaggtctcaataactgccgagcagaa
aaggaaaaaacaacactggagagtctgactcagcaactggcagttaaacagaatgaagaa
ggaaaatttagccatgccatgatggatttcaatatgagtggagattctgatggaagtgct
ggagtctcagaatcaagaatttatagagaatccagggggcgtggtagcaatgaaccccac
ataaagcgtccaatgaatgccttcatggtgtgggctaaagatgaacgaaggaaaatcctt
caggcctttcctgacatgcacaattccaacatcagcaagatactgggatctcgctggaaa
gctatgacaaacctagagaaacagccatattatgaggagcaagcccgtctcagcaagcag
cacctggagaagtaccctgactacaaatacaagcccaggccgaagcgcacctgcctggtg
gatggcaaaaagctgcgcatcggggaatacaaggcaatcatgcggaacaggcggcaggaa
atgcggcaatacttcaacgttgggcaacaagcacagatccccatcgccactgctggtgtc
gtgtaccctggagccatcgccatggctggaatgccctcccctcatctgccctcagagcac
tcaagcgtgtccagcagcccggagcctgggatgcctgttatccagagcacttacggtgtg
aaaggagaggagccacatatcaaagaagagatccaggctgaggacatcaacggagaaatt
tatgatgagtacgaggaggaagaggatgatccagatgtagattatgggagtgacagtgaa
aaccatattgcaggacaagccaactga
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