Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112392053
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Entry
112392053 CDS
T08872
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112392053 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112392053 (EDC4)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112392053 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
112392053 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
DUF445
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
112392053
NCBI-ProteinID:
XP_024589360
UniProt:
A0A341AFG9
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNAYNGDLNGLLVPDPLCSGDGT
STNKPGLRAMPPINLQEKQVICLLGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRSNHSTWPVDVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVVPLPTHP
AHEDFAFPTAFGESRPELASEGLGSATHGSQSDLRRIVELPAPADFLSLSSETKPKLMTP
DAFMTPSTSLQQIAASPSSSSSSSSSSSLTAVSAMSSTSAVDPSLPSRPPEELTLSPKLQ
LDGGLTMSSSSSLQASPRSLLPGLLPSPADKLPPKGPGQVPTAASTLSLELQEVEPLGLP
QASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLS
PRPRPGPELGPQLSLDGGPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPDITRETCSS
LAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGGFGTKVP
TPRLPAKDWKTKGSPRASPKLKRKGKKDDGDSSVGSRLTEHQVAEAPEDWPALIWQQQRE
LAQLRHSQEELLQRLCTQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQ
EQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVEGS
MKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDS
FRLGTQEYLQQLESHMKSRKAREQEAREPMLAQLRGLVSTLQGATEQMAATVSSSVRAEV
QHQLHVAVGSLQEAILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPATHLD
CQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLS
LIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNS
LGKAARRLSLMLHGLMTPSLP
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggcccgcggggggtcccagtgcagagagccagcgaccatctaatgcc
tacaatggagatctcaatgggctcttggtcccagaccccctctgctcaggtgatggtact
tcaacaaacaagcctggtctccgagccatgcctcctattaacctgcaggaaaagcaggtc
atctgcctcttaggagacgacagttccacctgcatcgggattttggccaaggaggtggag
attgtggccagcagtgactctagcatctcgagcaaggcacgggggagcaacaaggtgaaa
atccagcccgtcgccaagtatgactgggagcagaaatactactatggcaacctgattgct
gtgtccaactctttcttggcctatgctattcgggctgccaacaacggctcagcgatggta
cgggtgatcagtgtcagcacttcagagaggaccctgctcaaaggcttcacaggcagtgtg
gctgatctggcctttgcacacctcaattccccacagctggcctgcctggatgaggcaggc
aacctgtttgtgtggcgcttggccctggttaatggcaaaattcaagaagagatcttggtc
catatccgacagccagagggcactccactgaatcacttccgcaggatcatctggtgcccc
ttcattcccgaagagagtgaggactgctgtgaggagggcagcccaacggtggccctgttg
catgaggaccgggctgaggtgtgggacctggacatgctccgctccaaccacagcacctgg
cccgtggatgtcagccagatcaagcagggcttcatcgtggtaaaaggccacagcacatgc
ctaagtgaaggggccctctcacctgatgggactgtcctggctaccgcaagtcatgatggc
ttcgtcaagttctggcagatttacattgaggggcaggatgagccaaggtgtttgcacgag
tggaagcctcacgatgggaggcccctctcctgcctcctgttctgtgacaaccacaagaaa
caggatcctgaggtccccttctggaggttccttattactggtgctgaccagaatcgggag
ctgaagatgtggtgcacggtgtcctggacctgcctgcagaccattcgcttctccccagat
atcttcagctcagtgagtgtgccccccagcctcaaggtttgcctggacctctcagcagaa
tacttgatactcagcgatgtgcaacggaaggtcctctatgtgatggaactgctgcagaac
caggaggagggccgtgcctgcttcagctccatctctgagttcctgctcacccaccctgtg
ctgagcttcggtatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcca
gccgaagaggagaatgacagcctaggggctgatgggacccacggagctggtgccatggag
tctgcagctggtgtgctcatcaagctcttttgtgtgcacactaaagcattgcaagatgta
cagatccgcttccagccacagctgaaccctgacgtggtggtcccgctccctacacaccct
gcccatgaggactttgcttttcccacagcatttggagagtctcgaccagaactggcttct
gagggcctgggatcggccactcacggctcccagtctgacctccgacgcatcgtggagctg
cctgcacctgccgacttcctcagtctgagcagtgagaccaagcccaagctgatgacacct
gacgccttcatgacacctagcacctccctgcagcagatcgctgcatctcccagtagcagc
agcagcagcagcagcagttcctctcttacggcggtgtctgccatgagcagtacttcggcc
gtggacccctccttgcccagcaggccacctgaggagctgaccttgagccccaagctacag
ctggatggcggtctgacaatgagcagcagcagcagcctgcaggcaagcccacgtagcctc
ctgcctggcctgctcccaagtccggccgacaaattgcctcccaaagggcctgggcaggtg
cctactgctgcctctacactatccctggagctgcaggaagtggagcccctggggctaccc
caggcgtcccccagccgcacccgctcccccgatgttatctcctcggcttccactgctctg
tcccaggatatccctgagatcgcatctgaggcgctgtcccgtggctttggctcctccgct
ccggagggcctggagccagacagtatggcctcagctgcttcagcactacacttgctgtct
ccacggccccggccgggacccgagcttggcccccagcttagcctggatggaggccctggg
gatggggatcggcatagtaccccttccctcctggaggcagccttgacccaggaggccacg
gcccctgacagtcaggtctggcctacggcaccagacattactcgtgagacctgcagcagc
ctggcagagagcccccggaatggcctccaggaaaagcacaagagcctggcctttcaccga
ccaccttatcacctgctacagcaacatgacagtcaggacgccagtgccgagcaaagcgac
catgatgatgaggtggccagcctggcctctgctgcagggggttttggcaccaaagttccc
actccacgtcttcctgccaaggactggaagaccaaaggatcccctcgggcctcacccaag
ctcaagcgaaagggcaaaaaggatgacggggattcgtccgtgggatcccggctcacagag
caccaggtggcagaggcccctgaggactggccagcactaatttggcaacagcagagagag
ctggcacagcttcggcacagccaagaagagctgctacagcgtctgtgcacccaacttgaa
ggcctgcagagcaccgtcacgggccacgtagaacgtgccctagagtcacggcacgagcag
gagcagcggcgactggagcgggcactggccgagggacagcagcgtggtgggcagctgcag
gagcagctgacgcaacagctgtcccaagcgctatcttcagctgtggctgggcggctggag
cgcagcatacgggatgagatcaagaagacggttcctccgtgtgtgtctaggagtctggag
cccgtggcaggccaactgagcaactcagtggccaccaaactcacagccgtggagggtagc
atgaaagagaatatctccaagctgctgaagtccaagaacttaacagatgccattgcccga
gcagccgcagacacgttacaggggccaatgcaggccgcctaccgtgaagccttccagagc
gtggtactgcccgcctttgagaagagctgccaggccatgttccagcagattaatgatagc
ttccgactgggcacgcaggaatacttgcagcagctggagagccacatgaagagccgaaag
gcacgagaacaggaggcgcgggagcccatgctggcccagctgcggggcctggtcagcaca
ctgcagggagccacggagcagatggcggctaccgtgtccagcagcgttcgggctgaggtg
cagcaccagctgcacgtggctgtgggcagcctgcaagaggcaattttagcacaggtgcag
cgcattgttaagggtgaggtgagtgtggcactcaaggagcagcaggctgccgtcacctct
agcatcatgcaggccatgcgctcagccgctggcacacctgtccctgccacccacctcgac
tgccaagcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggcc
ttccagcaggccctgacagctgccgacctgaacctggtgctgtacgtgtgtgaaactgta
gacccaggccaggtttttgggcagccaccttgccccctctcccagcctgtactcctttca
ctcatccagcaactggcctctgaccttggcactcgaactgacctcaagctcagctacctg
gaagaggctgtgatgcacctggaccacagtgaccccatcactcgggaccacatgggctcc
gtcatggcccaggtgcgccagaagctcttccagttcctgcaggcggagccacacaactca
cttggcaaagcggcccggcgtctcagcctcatgctgcacggccttatgacccccagcctc
ccttag
DBGET
integrated database retrieval system
