Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112392575
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Entry
112392575 CDS
T08872
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
112392575 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nasi01009
]
112392575 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nasi04515
]
112392575 (PCDH20)
Protein phosphatases and associated proteins [BR:
nasi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112392575 (PCDH20)
Cell adhesion molecules [BR:
nasi04515
]
Cadherins
Protocadherins
112392575 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
RET_CLD1
He_PIG
Motif
Other DBs
NCBI-GeneID:
112392575
NCBI-ProteinID:
XP_024590119
UniProt:
A0A341AJR6
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MRGRGDARSSRALPVSWRPATWHPRLDMGRLSRSRSSTSHRNLPHLLLFFLFVGPFNCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLVHGAGRQDPQSQPPEHSGAERNPPLSFSL
ASQGLSGQYVILDNRSGELHTSAQEIDREALCLEGGGGAAWRSSISISSSPSADSCLLLL
DVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSEISVWVPENAPVNTRLAIEHPAMDRDTG
TNGVQTYRLLDYHRMFTLDVEENENGERTPYLIVMGLLDRETQDQYVSIIIAEDGGSPPL
LGSATLTIGISDINDNCPLFTDSQINATVYGNATVGTPIAAVQAVDRDLGNNAQVTYSYS
QKVPQVSKDLFHLDENTGVIKLFSKIGGSVLQTHKLTILANGPGCIPAMITALVTIIKVI
FRPPEIVPRYIANEIDGIVYLKELEPVKTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSPY
KPYSNEYLLETTKPMDYELQQFYEIAVVAWNSEGFHVKKMIKVQLLDDNDNAPIFLQPLV
ELTIEENNSPNAFLTKLDATDADSGERGQVSYFLGPDAPSYFSLDSVTGVLTVSTQLDRE
EKEKYKYTVRAVDSGKPPKESVATVAITVLDKNDNSPRFINKDFSFFVPENFPGYGEIGI
ISVTDADAGQNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGEP
PLSSTTKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAIDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVEPMSCMPTLVALSVISLGS
ITLVTGMGIYICLRGKRHHREDENLEVQIPLKGKIDLHMRERKPMDISNI
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgaggggatgcgcgcagctcgcgggccctgccagtgagctggcgcccggcg
acctggcacccgcgcctggatatggggcgtctaagtcgttccaggagcagcaccagccac
agaaacctaccgcatctgcttctgtttttcctcttcgtgggacccttcaactgcctggcg
agttacagccgggccacggagcttctgtacagcctgaacgagggactgcccgcgggggtg
ctcatcggcagcctggccgaggacctgcggctggtgcacggagcagggaggcaggacccg
cagtcgcagcccccggagcacagcggcgccgagcggaaccctcctctctccttcagcctg
gcctcccagggactgagtggtcagtacgtgatcctagacaatcgctccggggagctgcac
acttctgcccaggagatcgacagggaggccctgtgtcttgaaggaggtggaggggctgcc
tggcggagcagcatttccatctcctcttcgccttccgctgactcttgtcttttgcttctg
gatgtactggtcctgcctcaggaatactttaggtttgtgaaggtgaaaatcgctatccgg
gacatcaatgacaatgccccacagttccctgtttccgaaatatcggtttgggtcccagaa
aatgcacctgtaaacacccggctggccatagagcatcctgccatggaccgagatacaggc
actaacggagttcagacctaccgcttgctggactaccatcgtatgttcaccctggacgtg
gaggagaatgaaaatggggagcgaacaccctacctaattgtcatgggactgttggacagg
gagacccaggaccagtatgtgagcatcatcatagctgaggatggtgggtctccaccactg
ttgggcagtgccaccctcaccattggcataagtgacattaatgacaattgccctctcttc
acagactcacaaatcaatgccactgtgtatgggaatgctacagtcggcacaccgattgca
gctgtccaggctgtggacagagacttgggaaacaatgctcaggtcacctactcttacagc
cagaaagttccacaagtatccaaggatttattccatctggatgaaaacactggagtcatt
aaacttttcagtaagattgggggaagtgttctgcaaacacacaagctcaccattcttgct
aatgggccgggctgcattcctgctatgataactgccctggtgaccattatcaaagtcatt
ttcagaccacctgaaattgtccctcgttatatagcgaatgagatagatggtattgtttac
ctgaaagaactggaacctgttaaaactccaattgcatttttcaccataagagatccagaa
ggtaaatacaaggttaactgctacttggatggtgaaggaccatttaggttatcaccctac
aaaccatacagtaatgaatatctgctagaaaccacaaaacctatggattatgagctacag
cagttctatgaaatagctgtggtagcctggaactctgagggatttcatgtcaaaaaaatg
attaaagtgcaacttttagatgacaatgataatgctcctattttccttcaacccttggtg
gaactaaccattgaagaaaacaactcacctaatgcctttttgactaagctagatgctaca
gatgctgacagtggagagaggggacaagtttcatattttctgggacctgatgctccatca
tacttttccttagacagtgtcacaggagttctgacagtttctactcagctggatcgagaa
gagaaagaaaagtacaagtacacagtcagagctgttgactctgggaagccacccaaagaa
tcagtagccaccgtggctatcacagtgttggataaaaatgacaacagtcctaggttcatc
aacaaggacttcagcttctttgtgccagaaaactttccaggatatggtgaaattggaata
attagtgtaacagatgccgatgctgggcaaaatggatgggttgccctctccgtggtgaac
cagagtgatatttttgtcatagacacaggaaagggcatgctgagagccaaagtctctttg
gacagagagcagcaaagctcctatactttgtgggttgaagctgttgatggaggtgagcct
cccctctcctctaccacaaaaatcacaattctccttctagatatcaacgacaacccacct
cttgttttatttcctcaatctaacatgtcttacctgttggttttaccttctactctccct
ggctccccagttacagaggtctatgcaattgacaaagacacaggcatgaatgctgtcata
gcttacagcatcatagggagaagaggtcctaggcctgagtcatttaggattgaccctaaa
actggcaacattactttggaagaggcattgctgcagacagattatgggctccatcgttta
ctggtgaaagtgagtgatcacggttatcccgaacctctccattccacggtcatggtgaac
ctatttgtcaatgacactgtcagtaatgagagctacatcgagagtcttttaagaaaggaa
ccagaaattaacatagaggagaaagaaccacaaatctcaatagaaccgactcacaggaaa
gttgagcctatgtcttgtatgcccaccttagtagctctgtctgtaataagcttgggttct
atcactctcgtaacagggatgggcatatacatctgtttgagagggaaaaggcatcacagg
gaagatgaaaatttggaagtacaaattccattaaaaggaaaaattgacttgcatatgaga
gagaggaaaccaatggatatttctaatatttga
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