Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112392990
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Entry
112392990 CDS
T08872
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112392990 (COL17A1)
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Paralog
GFIT
Motif
Pfam:
Collagen
DUF2868
Motif
Other DBs
NCBI-GeneID:
112392990
NCBI-ProteinID:
XP_024590722
UniProt:
A0A341ANI8
LinkDB
All DBs
Position
Unknown
AA seq
1514 aa
AA seq
DB search
MDVTKKNKRDGSEVTERLITETITTRLTSLPPKGGTSNGYAKTGSLGGGSRLEKQSLMHG
SSGYINSSGSTRGNASTSSYRRAPGELASTLPNSPGSTFERKTHVTRHGTYEGSSSGNSS
PEYPRKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRN
SSNTLPIPKKGTVETKLVTASSQSVFGTYDTTILDANLPSHMWSSTLPAGSSMGTYHNNI
TAQSSSLLNTNAYSAGSVFGVPNNMASSSPALQPGISTSSSVFGMQNNLAPSSPALSHGM
ATTSTAYGVKKNMPQSPAVVSTGVSTSTAGTTSVQNNDLLHKDCKFLILEKDNTPAKKEM
ELLIMTKDSGKVFTASPASVTATSFSEDTLRQEKQAAHNTDTYLMSEANGDVKTVSAKGK
AASADFYGYNRHRGGGSSSGRGAGSGGSGGGGKGSWGAVPAWCPCGSCCSWWKWLLGLLL
TWLLLLGLLFGLIALAEEVRNLKARVDELEKVRSSVLLYSKKMERTSQDSVQGVAPRLGE
GVGKSGLDGYSQEDLWQFMRGKLMAEQENGNLRGSPGPKGDMGSQGPKGDRGFPGTPGIP
GPLGHQGPEGPKGQKGSVGEPGMEGPMGQRGREGPMGPRGEPGPPGFGEKGDRGDAGQPG
IQGPPGVPGSVGPKGSSGLPGPQGPPGSVGRQGLRGEVGLPGIKGDKGPMGPPGPKGDQG
EKGPRGLTGEPGLKGLPGAVGEPGPKGAMGQAGPDGHQGPRGEQGLPGMPGIRGLPGPSG
DPGKPGLTGPQGPQGLPGTPGRPGAKGEPGAPGRIVTSEGSSTLTVPGPPGPPGAMGPPG
PPGASGPIGPAGLPGQQGPRGEPGLPGESFMGSSSSISEVLSAQGLDLRGPQGPPGPPGP
PGPSIPGPPGPRGPAGEGLPGPPGPPGSLLTSSETFFSGPPGPPGPPGPKGEQGAPGPRG
HQGERGLPGFSASGSSSLGLNLQGPPGPPGPQGPKGDRGDPGVPGAPGIPSGPSRGGSSS
STMFMQGPPGPPGPPGPPGSISSSGLEIQQYISDYMQSDSIRSYLSGVQGPPGPPGPPGP
VTTITGETFNYSELASLVVSYLQTSGYSISTSSTSISSEDILAVLQRDDVRQYLRQYLMG
PRGPPGPPGASGGWSLQSLDYAELSSRVLSYMSSSGVSIGLPGPPGPPGLPGTSYEELLS
LLQGSEFRGIVGPPGPPGPPGLPGSAWSSISMEDLSSYLQTAGLSSIPGPPGPPGPPGPR
GPPGVSGALVTYAAENSDNFRSELISYLTSPDVRSFIVGPPGPPGPQGPPGDSRLVSTDS
SYSRGSSSSSLGRASSYGSSTGIGGASGGSLGEGGAFGLDTGRGRGYGAAAEGGTYGGDG
GFGASFAGGLDYNELAVRVSDSLQRQGLLQGMAYTVRGPPGRPGPQGPPGISKVFSAYSN
VTEDLMDFFRTYGAIPGPPGQNGEMGIPGPKGERGPAGPPGQPGPPGPRGHKGEKGDKGD
QVYGRRRRSIAVKP
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaccaagaagaacaaacgagatggcagtgaagtcaccgaaagacttatcacg
gaaacaataactacaagacttacgtccttaccaccaaaagggggcaccagcaacggctat
gctaaaacaggctctcttggtggagggagccggctggagaaacagagcctgatgcatggc
agcagcggctacataaactcaagtgggagcacacgaggcaatgcctctacctccagttac
aggagggcccctggtgagttggcctccactctgcccaactcaccaggctcgacctttgag
agaaaaactcacgtcacccgccatggaacatacgaagggagctccagcggcaactcttcc
cctgagtaccctcggaaggagtttgcgtcttcttcaaccagaggacggagccaaacacga
gagagcgagatccgagttcgactgcagagtgcatccccatctacccgatggacggaattg
gatgacgtcaagcgtttgctcaagggaagccgatcagcaagcgtgagccccacccggaat
tcctctaacacactccccatccccaagaaaggcaccgtggagaccaaactggtgacagcg
agctcccagtcagtgttcggcacctatgacacaaccatcctggatgccaaccttccctcc
cacatgtggtcctccacactgccggcagggtcctccatgggcacctatcacaacaacatc
acagcccagagctcatccctcctcaacaccaatgcctattctgcaggatcagtctttgga
gttcccaacaacatggcctccagctccccagctctgcagcctggaatcagcaccagctcc
tcagtgtttggcatgcagaacaatctggcccccagttcacccgccctgtcccatggcatg
gccaccacctccacagcgtatggtgtgaagaaaaacatgccccagagccctgccgttgtg
agcactggggtgtccacctccacagccggcaccacaagtgtccagaacaatgacctcttg
cacaaggactgtaaattcctgatcctggagaaagacaacacacctgccaagaaggagatg
gagctgctgatcatgaccaaggacagcgggaaggtcttcaccgcctcccccgccagtgtc
actgcaacttctttttcagaggacaccctgagacaggaaaagcaagccgcacacaacact
gacacctacctaatgtcagaagctaatggagacgtgaagaccgtgtccgcaaagggcaag
gccgcctctgccgacttctacggctacaaccgccaccgtgggggcggcagtagcagcggc
aggggcgccggcagcgggggctccggtggaggcggcaagggctcgtggggggcagtgcca
gcctggtgcccctgcggctcctgctgcagctggtggaaatggctgctgggcctgctcctc
acctggctgctgctcctggggctgctctttggcctcatcgctctggccgaggaggtgagg
aacctgaaagcgcgtgtggacgagctggagaaggtcaggagcagcgtactgctttacagc
aagaagatggagaggaccagccaggactccgtgcagggtgtcgcgccgaggctgggcgag
ggtgtcggcaaatctgggcttgacggctacagtcaagaagacctatggcaattcatgagg
ggcaagctgatggcagaacaggaaaacggaaatctccgaggaagccctggccctaaaggt
gacatgggaagtcaaggccctaaaggagatcgagggttccctggaactccaggtatccct
gggcccttgggccaccaaggtccggagggaccaaagggacaaaaaggcagcgtgggagag
cctggcatggagggacccatgggccagagagggcgagaaggccccatggggcctcgcggt
gaaccagggcctcctgggtttggagagaaaggagacagaggggatgctggtcaaccgggc
attcaaggcccacctggtgtcccaggttctgtgggtcccaaaggttccagcggtcttcct
ggcccacagggtcccccaggctctgtaggtcgccaagggctccgaggtgaagtgggactc
cctggcatcaaaggtgacaaaggacctatgggaccaccaggacccaaaggtgaccagggt
gagaaaggaccccgaggcctcacaggcgagcccggcttgaaaggtttacctggtgctgtg
ggcgagcccgggcctaaaggagcaatgggacaagctggccccgacggacaccaaggccca
agaggggaacaaggtcttccagggatgcccggaatccggggcttaccaggaccttctgga
gacccaggaaagccaggtctcacaggaccccaaggacctcagggacttcctgggaccccc
ggccgaccaggggctaaaggtgaaccaggagctccaggcaggatcgtgacttcagaggga
tcatcgactctcactgtcccaggtcccccgggacctcctggagccatgggacctccagga
cctccaggtgcctcaggccccatcggcccagctggtctcccaggacagcaaggcccgcga
ggggagccaggacttcctggtgaatcgttcatgggcagcagcagctccatctctgaggtc
ctctccgcccagggtcttgatttacgaggtccccaaggcccacctggaccacctgggcca
ccaggaccatccattccaggacccccaggaccccgaggcccagcaggggaaggcttgcca
ggcccaccaggcccaccaggatctctcctgaccagctcagagaccttcttctctggccct
ccaggcccacctggccccccaggccccaagggagagcaaggtgccccaggcccccgagga
caccaaggcgagcgaggcctcccagggttctcagcctcaggctccagttctctcggactc
aacctacaaggaccgccaggcccacccggccctcagggacccaagggtgacagaggtgac
cccggagtcccaggggctcccggcattcccagtgggccctctcgagggggatcgtcatcg
agcaccatgttcatgcagggcccgccaggcccaccagggccccccgggcctccaggctcc
atcagcagctccggcctggagattcagcagtacatctctgactacatgcagagtgacagt
atcaggtcttatctatctggagttcagggtcccccaggcccacctggtccccccgggcct
gtcaccaccatcacgggtgagactttcaactactcagagctggccagcctcgtcgtgagc
tacttacagacttcggggtacagcatcagcacgtcctccacctccatctcctctgaagac
atcctggctgtgctccagcgggatgacgtgcgtcaatatctacggcagtacctgatgggc
cctcggggtcccccagggccaccaggagccagtggaggttggtccctccagtctctggac
tacgcagagctgagcagccgcgtcctcagctacatgtccagctccggagtcagcattggg
cttcctggccccccagggcccccaggcttgccgggaacatcctacgaggagctcctctcc
ttgctccaagggtctgaattcagaggcattgttgggcccccaggtccccctgggccacca
gggctcccaggcagcgcgtggtccagcatcagcatggaggacctctcgtcctacctgcag
actgctggcttgtcatccatcccaggccctcccggtccccctggccccccaggccctcga
gggcccccgggtgtctcaggagctctggtgacatacgcagctgaaaacagcgacaacttc
cggagtgagctgatcagctacctcacaagtcctgatgtgcgcagcttcatcgtcggcccg
ccgggtcctcccgggccccagggtccccccggggacagccgcctggtgtccacggacagc
tcctacagccggggcagcagctcctcttctctcggtcgggcctcttcctacggctcctcc
acgggcataggaggagcaagcggaggctccctgggcgaagggggagcctttggcctggac
acgggccggggccgaggctatggggcagcggcagaaggcggcacgtatggcggtgacggt
ggtttcggggccagctttgctggaggtctggattacaacgagctggccgttcgggtgtct
gacagcttgcagcgtcagggcctgctccaagggatggcctacactgtgcggggcccacca
ggccggcctgggccccaggggccccctggcatcagcaaagtcttctccgcctacagcaac
gtgaccgaggacctcatggactttttcagaacgtatggagccatcccaggaccccctggg
cagaatggagagatgggcatccctggccccaaaggtgagaggggccctgctgggccacca
ggtcagcctggaccacccggccctcgaggacacaagggagaaaaaggagacaaaggtgac
caagtctatggccggagaaggagaagcatcgccgtcaagccatga
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