Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112393011
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Entry
112393011 CDS
T08872
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nasi03021
]
112393011 (SUPT6H)
03036 Chromosome and associated proteins [BR:
nasi03036
]
112393011 (SUPT6H)
Transcription machinery [BR:
nasi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
112393011 (SUPT6H)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
112393011 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
112393011
NCBI-ProteinID:
XP_024590760
UniProt:
A0A341AJH1
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSISVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGDGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELIDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQVFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQPQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggccgaggagtcagaggaagagtacaatgatgaaggc
gaggtggtgccccgggtcaccaagaaatttgtagaagaggaggatgacgatgaggaggag
gaggaggagaacctggatgatcaggatgaacaaggaaacctgaaaggctttatcaatgac
gatgacgatgaagatgaaggggaggaggatgagggtagtgactctggtgattcagaagat
gatgttggccacaagaagagaaaacgcacatcttttgacgaccgcttggaggatgatgat
tttgatctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaataccgacgt
gtcaaaaaaatgtcagatgatgaggacgatgacgaagaggaatatggcaaggaggaacat
gaaaaagaagctattgcagaggagatctttcaggatggggaaggggaagaagggcaggag
gccgtggaggcccccatggctcctccagaggaggaggaagaagatgatgaagagtcagac
attgatgacttcattgtggatgacgatggacaaccactgaaaaaacctaagtggcggaaa
aagcttcctggatacactgatgcggccctgcaagaagcccaggagatttttggtgtggac
tttgactatgacgaatttgagaaatataatgagtatgatgaagaactggaggaagagtat
gagtatgaggacgatgaggctgagggcgagatccgagtgcgccccaagaagaccaccaag
aaacgtgtgagccgcaggagcatctttgagatgtatgagcccagtgagctggaaagcagc
cacctcacagatcaggacaatgaaatccgagctactgacctgcctgagaggttccagctc
cgttccatctccgtcaagggggctgaagatgatgaactggaagaagaggctgactggatc
tataggaatgcctttgccacaccaaccatttctctgcaggaaagctgtgattacctagac
cgagggcagccaaccagcagcttcagtcgaaaaggacctagcacaattcagaagattaaa
gaggccctgggcttcatgagaaatcaacattttgaggtgcctttcattgctttctaccgg
aaggagtacgtggagcccgagttgcatatcaatgacctgtggagggtgtggcagtgggat
gaaaagtggacccagctgaggatccgtaaggagaacctaacacggctgtttgagaagatg
caggcttatcagtacgagcaaatctctgctgaccctgacaagccccttgctgatggcatc
cgggctctggacaccaccgacatggagaggctcaaggatgtacaatcaatggatgaactg
aaagatgtctacaatcatttcctgctttattatggtcgtgacatccccaagatgcagaat
gccgccaaggccagccgcaagaagctaaagcgtgtaagggaagagggagatgaggaaggt
gatggtgaggaggcagaagatgaggagcagagagggccagagctcaagcaggcttcccgc
cgagatatgtacaccatctgccagagcgctgggctagatggcttggcaaaaaagtttggg
cttactcctgagcaatttggggaaaacctccgggacagttaccagaggcacgagacagag
cagtttcctgcagagcccttggagctggccaaggattatgtttgcagccagttccctaca
ccagaagctgtgctggaaggtgcccgctacatggtagccctgcagattgcccgagagccc
cttgtccggcaggtgctgaggcaaactttccaggagagagccaagctcaatataaccccc
accaagaaaggcagaaaggatgtggatgaagcccactacgcttactccttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagttcctcaagatatgcctggctgaa
gatgaagggctgctcaccattgacatcagcatagacatgaagggggtggaaggctatggc
aatgaccagacgtattttgaagaaatcaaacaattttactaccgagatgagttcagccac
caggtgcaggagtggaatcggcagcgcaccatggccatcgagcgagctttgcagcagttc
ctgtacgtgcagatggccaaagagctcaagaacaagctgctggccgaagccaaagaatat
gtcataaaggcctgtagtcggaagctctacaactggttgagggtggcaccctaccggcca
gatcaacaggtagaggaagatgatgactttatggatgagaaccaagggaagggcatccga
gtcctaggcattgctttctcctctgccagagatcaccctgtgttctgcgccttggtcaac
ggtgaaggagaagtgacagacttcctccggctgcctcattttaccaaacggcgaactgca
tggagagaggaagaacgggagaagaaggctcaagacattgaaactctaaagaaattcctc
ctgaacaaaaagcctcatgtggtgacagttgcaggagagaacagggatgcccagatgttg
attgaggatgtgaagcgcattgtgcatgagctggaccaaggtcaacagctgtcctctatt
ggggtggagctgattgacaatgaattggccattctctatatgaacagcaagaaatcagag
gcagagttccgggattaccctcctgtgctgagacaggcagtctccctggcccggcgtatc
caggaccctctgattgaatttgcccaggtttgcagctctgatgaagacattctgtgcctc
aagtttcaccccttgcaggagcatgtggtgaaagaagagctgctcaatgccttgtactgt
gaatttatcaaccgagtcaatgaggttggagttgatgtcaaccgtgccattgcccacccc
tacagccaggccttaattcagtatgtctgtggcctgggacctcgaaaagggacccatctc
ctaaagatcctgaaacagaacaacaccaggctcgagagccggacccagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgcgctggcttcctcaagatcgatacggcc
tccctgggggacagcactgactcatatattgaagtccttgatggttcccgagttcaccct
gagacctatgagtgggccaggaagatggcagtggatgctctggaatatgatgagtcagcc
gaggatgccaaccctgcaggggcccttgaggagatcttggaaaacccagagcgactcaag
gacctggacttggatgcctttgcagaagaactggagaggcagggctatggtgacaaacac
atcactctgtatgacatccgagcagagctgagctgtcggtataaggacctccggacagcc
tatcgctctcccaacacagaggaaatcttcaatatgttaaccaaagaaacaccagagacc
ttctacattggaaagctcattatctgcaacgtcactggcatcgcccataggcgtccacag
ggtgagagctatgaccaagcaatccgcaatgatgagacagggctatggcagtgccccttc
tgtcaacaggacaatttccctgaactaagtgaggtctggaaccactttgacagtggttca
tgcccaggccaggccatcggtgtcaaaacaaggctagacaatggtgtcactggcttcatc
cccaccaaattcctcagcgacaaagtggtaaagcggccggaggagcgagtgaaggtggga
atgactgttcactgccgcatcatgaagattgacatcgagaagtttagtgcagacctgacc
tgccgtacctcagacctcatggacaggaacaacgagtggaaactgcccaaggacacctac
tatgactttgatgctgaagcagcagaccacaagcaggaggaggacatgaaacggaagcag
cagcggaccacatatatcaagcgagtgattgcacacccatccttccataatataaatttt
aagcaagcagaaaaaatgatggagaccatggaccagggtgacgtgatcatccgaccgagc
agcaagggtgaaaatcacctgacagtgacctggaaggtcagtgacggcatataccagcac
gtggatgtgcgggaagaaggcaaggaaaatgccttcagcctgggagccaccctgtggatc
aacagtgaggaatttgaagacttggatgagattgttgcccgctatgttcagcctatggca
tcctttgcccgggaccttctgaaccacaagtattatcaggactgcagtggtggggaccgt
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcattccctat
ttcatctgtgcctgcaaggaactgcccggcaagttcctactgggataccagccccggggt
aaacccaggatagaatatgtaacagtgactccagaaggattccggtaccggggccaaatc
ttcccgactgtgaatggccttttcagatggtttaaggatcattatcaggatcctgtacca
ggcatcacccccagtagcagcagcaggacccggacacctgcctctatcaatgctacccca
gccaatatcaaccttgcagatctgacacgggctgtgaacgccctgccccagaacatgacc
tcacaggtgttcagtgccattgctgccgtgacaggccaaggccagaaccctaatgccacc
ccagcgcagtgggcctccagccagtatggctatggcggcagtggagggggcagcagcgct
taccacgtgttcccgacgccagcccagcagccggtggccacgccactaatgacccccagc
tactcctacacaaccccaagccagcccatcaccacaccacagtaccaccagctacaggcc
agcaccacccctcagtctgcccagccccagccccagccctcctccagctcccggcaacgg
cagcagcagccaaagtccaacagccatgcagccatcgactgggggaagatggcggaacag
tggctgcaggagaaggaggcagaacggcggaaacagaagcagcggctgacacctcggccc
tcccccagccctatgatcgaaagcacccccatgtctattgctggcgacgccaccccactc
ctggacgagatggatcggtag
DBGET
integrated database retrieval system
