Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112393328
Help
Entry
112393328 CDS
T08872
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112393328 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nasi03021
]
112393328 (SF3B3)
03041 Spliceosome [BR:
nasi03041
]
112393328 (SF3B3)
03036 Chromosome and associated proteins [BR:
nasi03036
]
112393328 (SF3B3)
Transcription machinery [BR:
nasi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
112393328 (SF3B3)
Spliceosome [BR:
nasi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
112393328 (SF3B3)
Complex B
112393328 (SF3B3)
Complex C
U2 SnRNP specific factors
112393328 (SF3B3)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
112393328 (SF3B3)
TFTC complex
112393328 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
112393328
NCBI-ProteinID:
XP_024591249
UniProt:
A0A341AMY0
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacttgaccttgcagcgagccactggcatcagctttgccattcatggc
aacttttctggaaccaaacaacaggaaattgttgtttcccggggaaagatcttggagctg
cttcgccctgaccccaacaccggcaaagtacacactctactaactgtggaagtatttggt
gtcatccggtcactcatggcctttaggttgacaggtggcacaaaagactacattgtggtt
ggtagtgactcaggtcggattgttattctggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacctttggcaagagtggatgccgccgcattgttcctggccagttc
ttagctgtggatcccaaagggcgagctgttatgattagcgccattgagaaacagaaattg
gtgtatatcttgaacagagatgctgcagcccggcttaccatttcatctccactggaggcc
cacaaagcgaacactttagtgtatcatgtggtcggagtagatgtgggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaactggggaagca
gcggctaatacccagcagacacttactttctatgagttagaccttggtttaaatcatgtg
gtccgaaaatacagtgaacctttggaggaacatggaaacttccttattacagttccaggg
gggtcagatggtccaagtggagtgctgatttgctctgaaaactacatcacctataagaac
tttggtgaccaaccagatatccgctgtccaattccaaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtctgctctgccacccataagaccaagtcaatgttcttc
tttttggcccaaactgagcagggagatatctttaagatcactttggagacagatgaagat
atggttaccgagatccggctcaagtattttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttccttttcgtagcatcagaatttggaaaccattacttatatcaa
attgcacatcttggagatgatgatgaagaacctgagttttcatctgccatgcctctggaa
gaaggagatacattcttttttcagccaagaccactcaaaaaccttgtgctggttgatgag
ttggacagcctctctcccattttgttttgccagatagctgacctggccaatgaagacact
ccacagctatatgtggcctgtggtaggggaccgaggtcatctctgagggtcttaaggcat
ggacttgaggtatcagaaatggctgtctcagagttacccggtaaccccaatgctgtctgg
acagtgcgtcggcacattgaagatgagtttgatgcttacatcattgtgtctttcgtgaat
gccacacttgtgttgtccattggagagactgtagaagaagtgactgactctgggtttctg
ggcactaccccaaccttgtcctgctccttgttaggagatgatgccttagtgcaggtgtat
cctgatggcattcggcacatacgagcagacaagagagtcaatgagtggaagactcctgga
aagaaaacaattgtgaaatgtgcagtgaaccaacgacaagtggtgatcgccctgacagga
ggagaactggtctattttgaaatggatccctcaggacagctgaatgaatacacagagcgg
aaggagatgtcagcagatgtggtgtgcatgagtctggccaacgtcccccctggagagcag
cggtctcgcttcctggctgtggggctggtggacaatactgtcagaatcatctccctggat
ccctcagactgtttgcaacctttgagcatgcaggctctcccagcccagcctgagtccttg
tgtattgtggaaatgggtgggactgagaagcaggatgagctgggtgagaggggctctatt
ggcttcttatacctgaatattgggctacagaatggtgtgttgctgagaacagtcctggac
cctgtcactggggatctgtctgacacccgcactaggtacctggggtcccgtcctgtgaaa
ctctttcgtgtccggatgcaaggccaggaggcagtgttggccatgtcaagccgctcatgg
ttgagctattcttaccaatctcgtttccatctcacccccctgtcttacgagaccctggag
tttgcatctggcttcgcctctgaacagtgccctgagggcattgtggccatctccaccaat
accctgaggattttggcattggagaagctgggtgctgtcttcaatcaagtagcctttcca
ctgcagtacacacccaggaaatttgtcatccaccctgaaagtaacaaccttatcatcatt
gagactgaccataatgcctacactgaggccacaaaagctcagaggaagcagcagatggca
gaggaaatggtagaagcagcaggggaggatgagcgagagctggctgcggagatggcagca
gcattcctcaatgaaaacctccctgagtccatttttggagctcctaaggctggcaatgga
cagtgggcctctgtgatccgagtgatgaatcctattcaggggaacacactggaccttgtc
cagctggaacagaatgaagctgcttttagtgtggctgtgtgcaggttctccaacactggc
gatgattggtatgtgctggtgggtgtggccaaagacctgatactgaatccccgatctgta
gccgggggctttgtctatacctacaagctcgtgaacaatggggaaaaactggagtttttg
cacaagactccagtggaagaggtccctgctgccattgccccattccaggggagggtgttg
attggtgtggggaagcttctgcgagtctatgacctgggaaagaagaagttactccgaaag
tgtgagaacaagcatatcgccaattacatctctgggatccagacaattggacatagggta
attgtatctgatgtccaggaaagtttcatctgggttcgctacaagcgtaatgagaaccag
cttatcatctttgctgatgatacctacccccgatgggtcacaacagctagcctcctggac
tacgatactgtggctggggcagacaagtttggcaacatttgtgtcgtgaggctcccacct
aacaccaatgatgaagtggatgaggatcccactggaaacaaagccctgtgggaccggggt
ttgctcaacggggcctctcagaaggcagaagtgatcatgaactatcacgtgggcgagaca
gtactttcgttacagaagaccacgctgatccctggaggctcagaatcgcttgtctatacc
accttgtcaggaggaattggcatccttgtcccgttcacatcccatgaggaccatgacttc
ttccagcatgtggaaatgcacctccggtctgagcatccccctctctgtgggcgagaccac
ctcagttttcgttcctattacttccctgttaagaatgtgattgatggagatctctgtgag
caattcaactccatggagcccaacaaacaaaagaatgtctctgaagaactggaccgaacc
ccacctgaggtgtccaagaagcttgaggacatccggactcgctacgccttctga
DBGET
integrated database retrieval system
