Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112393422
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Entry
112393422 CDS
T08872
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112393422 (EXOSC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112393422 (EXOSC6)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112393422 (EXOSC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
112393422
NCBI-ProteinID:
XP_024591440
UniProt:
A0A341ALF8
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MPGDNRRIRGPEESQPPQLYATDEDEVPAARDPTRLRPVYARAGLLSQAKGSAYLEAGGT
KVLCAVSGPRQVEGGERGGGPAGAGGETPAALRGRLLCDFRRAPFSXXXXXXXXXXXXXX
XXXXXXXXLQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAAIALADAGIEMY
DLVVGCGLSRAPGPEPTWLLDPTLLEEERAAAGLTVALMPVLNQVAGLLGSGEGGPTESW
AEAVRLGLEGCQRLYPVLQQCLVRAARRRGAATPP
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcctggggacaaccgccgcatccgcgggccggaggagtcgcagccgccgcagttgtac
gcgaccgacgaggacgaggtgccggccgctcgcgacccgacgcggctccggcctgtgtac
gcgcgcgccgggctgttgagccaggccaagggctcggcctacctggaggcgggaggcacc
aaggtgctgtgcgcagtgtccggcccacgccaggtagagggcggtgagcgcggtggcggc
ccggccggagcgggcggcgagaccccggccgcgctgcggggccgcctgctctgcgacttc
cgccgcgcgcccttctcggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnncgctgcaggaggcgctcgagccggccgtgcgcctgggc
cgctacccgcgcgcgcagctcgaggtgtcggcgctgctgctcgaggacggcggctcggca
ctggccgccgcgctcacggctgccgcgatcgccctggccgacgcgggcatcgagatgtac
gacctggtggtgggctgcggcttaagccgcgcgccggggcccgagcccacctggctgctg
gaccccacgctgctagaggaggaacgcgccgccgccggcctcaccgtggcgcttatgccg
gtgctcaaccaggtggccgggctgctgggcagcggggagggcggcccgaccgagagctgg
gcggaggccgtgcgcctgggtctcgagggttgccagcgcctctaccccgttttgcagcag
tgcttagtacgggccgcccgccggaggggcgccgccacgccgccctga
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