Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112393772
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Entry
112393772 CDS
T08872
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112393772 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nasi04990
]
112393772 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
nasi04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
112393772 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112393772
NCBI-ProteinID:
XP_024591917
UniProt:
A0A341ARR4
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQANVRIGDVVLSIDGISAHG
MTHLEAQNKIKGCTGSLNMTLQRASATPKPEPVPVQKGEPKEVVKPVPIPSPAVSKATST
TNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPAPGAAVTPPPFAASGPH
ANASVSADQRSSALSAGKPAVNVPRQPTVTSVCAETAQELAEGQRRGSQGDSKQQNGPPR
KHIMDRYTEFYHIPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTERMKESET
DNTKKANSAQEPSQPLPAAAAAAGSTPEGPGSPGSARPGVAGLTTAAAFKPLGSTGGIKS
PSWQRPNQAAPSTGRVASSGTSTGAVASANSAERQPQPSDEDTLVQRAEHIPAGKRTPMC
AHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYERFFAPVCG
RCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICHG
CEFPIEAGDMFLEALAYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNI
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagtgtgtccttggttggcccagctccttggggtttccggctacaaggt
ggcaaggatttcaacatgcctctgacaatctctagcctaaaagatggtggcaaagcatcc
caggcaaacgtaagaataggtgatgtggttctcagcattgatggaataagtgcacatggc
atgactcatcttgaagcccagaacaagattaagggttgtacaggctctttgaatatgact
ctgcaaagagcatctgctacacccaagcctgagccggttcctgttcaaaagggagaacct
aaagaagtagttaaacctgtgcccattccatctcctgctgtgtccaaagccacttccaca
accaacatggcctacaataaggcaccacgaccctttggttctgtgtcttcaccaaaagtc
acatccatcccatcaccatcgtccgccttcaccccagcccatgcgaccacttcatcacat
gcttcccctgcacccggggccgctgtcactcctcccccattcgctgcatctggaccgcat
gctaatgccagtgttagtgctgaccagcggtcatctgcactgagcgctggtaaacctgca
gttaatgtcccacggcagcccacagtcaccagcgtgtgtgccgagactgcccaggagcta
gcagagggacagagaagaggatcccagggtgacagtaaacagcaaaatggcccaccaaga
aaacacattatggatcgttatacagagttttatcacatacctactcacagtgatgccagt
aagaagagactgattgaagatactgaagactggcgtccaaggactggaacgactcagtct
cgctctttccgaatcctagcccagatcactgggactgaacgtatgaaagaatctgaaact
gataatacaaagaaggcaaacagcgcccaggagccctctcagccgctgcccgccgcagca
gctgcagctgggagcacgcctgaggggccgggaagcccaggctcggccagaccaggggtg
gccgggctcaccactgctgccgccttcaagcctctaggttccaccggcggcatcaagtca
ccaagctggcaacggcccaaccaagcagcaccttctaccggaagagtcgcaagcagtggg
acatccacaggagcagtggcatcagccaactcagccgaaaggcagccccagcccagtgat
gaggacactttggtgcaaagggccgagcacattcccgcagggaaacgaactccgatgtgt
gcccactgcaaccaggtcatcaggggaccattcctagtggcactggggaaatcttggcac
ccagaagaatttaactgtgctcactgcaaaaatacgatggcctacattggattcgtagag
gagcagggagccctgtattgtgagctctgctatgagagattctttgcacctgtatgtggt
cgatgccagaggaagatccttggagaagtcatcaatgctttgaaacaaacttggcatgtt
tcctgttttgtgtgtgtggcctgtgggaaacccattcgtaataatgtctttcacttggag
gacggcgagccctactgtgagaccgattattatgccctctttggcactatatgccatgga
tgtgagtttcccatagaagctggtgacatgttcctggaagctctggcctacacctggcac
gacacttgctttgtatgctcagtatgttgtgaaagtttggaaggtcagacctttttctcc
aagaaggacaagccactttgcaagaaacatgctcactctgtgaatatttga
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