Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112393881
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Entry
112393881 CDS
T08872
Symbol
NRDE2
Name
(RefSeq) protein NRDE2 homolog isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112393881 (NRDE2)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112393881 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
112393881
NCBI-ProteinID:
XP_024592058
UniProt:
A0A341AR33
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MALFPAFAGVSAEPESGSPRKELDWLSNPSFCVGTITSLSQQTEEVTAFVSEESLLTRSP
LNSEPSDESDTNKKPKQTSRKKKKEKKKKRKHQHHRKTKRKRGQSRSSGSKRGQSSSSGS
ESYTDSEKDISSRSIRSSKKESEKPNQENNATADIGRHFVWLEDIQALTGETFRTDKKPD
PANWEYKSLYRGDVARYKRKGDSCLGINPRKQCISWEGTSTEKKRSHKHVERYFTKKSVG
LMNIDGVAISSKTEPPSSESISFIPVKGADDVVSPVTTWLNPLGIYDEATTQWLQGRGPS
EQESKQPDSQPNKENVLLKAKVEEFNRRVWENPRDIQLWMAFVAFQDEVMRSPGLYAIEE
GQQEKQKRSLRLVLEKKLAILERAVESNPSSVDLKLAKLQLCTEFWEPATLVKEWQKLIF
LHPNNTALWQKYLLFCQSQFSTFSISKIQSLYGKCLSTLSAVKDGSILSHPELPGTEEAM
FALFLQQCHFLRQAGHSEKAVSLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPR
AGEKGARGWRAWMQQQERGGWVVVSPDDDDDEPEDDDQEIKDKTLPRWQIWLAAERSRDH
RHWRPWRPEKTKKQVEEDCEDPERQVLFDDIGQSLIQLSSPDLQFRLIAAFLQFLGVPSG
FSPPASCLYLAMDENSIFDNGLYDEKPLTFLNLSFSGVSCVGRTDQLGCRHWTRGHSREG
EEFIRSIFHLVMPLFSGKERSQLCFSWLRYEIAKVVWCLHTKNKKRLKSQGKNCKKLAKN
LLKEPDNRNNFCLWKQYAHLEWLLGNTEDARRVFDTALGMAGSRELKDHELCELGLLYAE
LEVELLPDVRGAAPARAIHVLTRLTEDGAYGPYTGQVLAIHILKARKAYEHALQDCLGES
CVSDPAPADSFSRLISLVKCFMLFQYLTIGIDAAVRIYEQVFAKHKVSVSAEGPGLEGSA
SPPSLSSALEAVTLMHTSLLRFHMKVAVYPLAPLREALSEALKLYPDNQVLWRSYVQIQN
KSHSASKTRRFFDAITRSAKPLEPWLFAIEAEKMRKRLVETVQRVDGREVYATIPETGLT
HRIRALFENAMRSDYGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYLDA
VEYFPDEMQEILDLMTEKELRVRLPLEELELLLED
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttccccgcctttgcgggtgttagtgcggagcccgagagcgggagccccagg
aaagaattagactggctgagcaacccaagcttttgtgttggaaccataacatctctgagc
caacaaactgaagaggtcacagcctttgtttctgaagagtcgctactgaccaggagtcct
ctgaattcagagccttcagatgaaagtgacactaacaaaaagcccaaacaaacaagcaga
aaaaagaagaaagagaaaaagaagaaaaggaagcatcagcaccacaggaaaaccaagaga
aaacgtgggcagtcacgtagcagtggatctaaacgtgggcagtcaagtagcagtggatct
gagtcatacactgattctgaaaaagacatatcttccagaagcatcagaagcagtaaaaag
gaatcagagaaaccgaatcaagaaaataatgccactgctgatattggacgtcactttgtt
tggcttgaggacattcaggctctgacgggagaaaccttcagaacagataagaagccggat
cctgcaaactgggagtataagtctctttaccgaggagatgtagcaagatacaagaggaaa
ggagactcctgccttggcattaaccctaggaagcagtgtatatcttgggaggggacttcc
acagaaaagaagcggtcacacaagcatgtcgagcgctactttacaaagaagagtgtggga
ttaatgaacattgacggagttgccattagcagtaaaactgaacctccctcatcagagtcg
atctcatttatcccagtgaagggtgcagacgatgtggtttcccctgttacaacctggttg
aaccctctggggatttatgatgaagccaccacgcagtggttacaaggccggggtccttca
gagcaagaatccaagcagccagattcacagcccaacaaagagaatgtgcttctcaaggcc
aaggtggaggagtttaacaggagggtttgggagaatcctcgggatattcagctgtggatg
gcatttgttgcttttcaggacgaggtcatgagaagtccgggcctgtacgccatcgaggaa
ggacagcaggaaaagcagaagcggtccctgaggctggttctggagaagaagctggccatt
ctggaacgggccgtggaaagcaacccgagcagcgtggatctgaaacttgccaagctgcag
ctctgcaccgagttctgggagcccgccactctggtcaaagagtggcagaaactgatattt
ttacatcccaacaatacagccctttggcagaaataccttttattttgccagagccagttt
agcaccttttccatatcaaaaattcagagtctttatggaaaatgcttgagtactttgtct
gctgttaaggacggcagcatcttgtctcaccccgagctgcctggcactgaggaggccatg
tttgccctctttcttcagcagtgccactttctgcggcaggctggtcactccgagaaggcc
gtctctctgttccaggccatggttgacttcaccttcttcaaacccgacagtgtgaaagac
ctgcctaccaaaggacaggtagaattctttgagcccttttgggacagtggagagcccagg
gccggggagaagggcgcccgaggctggagagcgtggatgcagcagcaggagcggggcggc
tgggtggtcgtcagcccagatgatgacgatgatgaaccagaagacgacgaccaggaaatt
aaagataagactctgcccaggtggcagatctggcttgctgctgagcggtcccgagaccac
agacactggcggccgtggcgccctgagaagaccaagaagcaggtggaggaagactgtgag
gacccggagaggcaggtgttgtttgatgatattggacagtctctgatccagctttccagc
ccggatcttcagtttcggctgattgcagcctttctgcagttcttgggtgtgccttccggc
ttcagccctccggcctcctgcctctatctggccatggatgagaacagcatctttgacaat
ggactttatgatgaaaagcccttgacttttctcaacctttcattttccggcgtcagctgt
gtcggacgcacggaccagctgggttgccggcactggaccaggggtcacagtcgagagggc
gaggagttcatccgcagcatcttccacctcgtgatgcctttgttttcagggaaggagagg
tctcagctctgcttctcctggttacggtacgagattgcaaaggtcgtttggtgtctgcac
actaaaaacaagaagagattaaaatcacaaggaaagaactgcaaaaaactagccaagaat
ctcctcaaggagcccgacaaccgcaacaatttttgcctctggaagcagtatgcgcatctg
gagtggttgctcggcaacacagaggacgccagaagagttttcgatacagcactcggcatg
gcagggagcagagaactgaaggaccacgagctgtgtgagctcggtctcctctacgccgag
ctggaggtggagctgttgccggacgtgagaggggccgccccagcccgagccattcacgta
ttgaccagactgaccgaggatggggcctacgggccctacaccgggcaagtcttggccatt
cacattttgaaagctcggaaggcttatgaacacgcgctgcaggactgtctgggggagagc
tgtgtctccgatccagctcccgccgattcctttagccgcctgattagcctggttaaatgc
tttatgctcttccagtatttgaccatagggatcgacgctgctgtgcggatatatgagcag
gtatttgcgaaacacaaggtctctgtttccgcagagggccctggtctggagggcagtgcc
agccccccgagcctgagcagtgcccttgaggccgtcaccctgatgcacacgagcctgctt
agattccacatgaaagtcgccgtctaccctctggctcctctgcgagaggctctctcggag
gctttaaagttgtatccggacaaccaggttctttggaggtcgtatgtacagattcagaat
aagtcccacagtgccagtaagaccagaagattcttcgatgcgatcaccaggtctgccaaa
cccttggagccgtggttgttcgcaattgaagctgagaaaatgaggaaaagactagtggaa
actgtgcagagggtagatggtagagaggtctacgccaccattcccgagaccggcctgaca
catcggatcagagccctgtttgaaaatgcgatgcggagtgactacggcagccagtgcccc
ttactgtggaggatgtatttgaattttttggtttccttaggaaataaagaaagaagcaaa
ggtgtgttctacaaagcacttcagaattgtccttgggcaaaggtgctgtacctggatgcc
gtggagtacttccccgatgagatgcaggagatcctggacctgatgacggagaaggagctc
cgggtgcgcctgccgctggaggagctggagcttctgcttgaggactag
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