Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112393884
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Entry
112393884 CDS
T08872
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112393884 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112393884 (CPSF2)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112393884 (CPSF2)
U7-dependent histone pre-mRNA processing factors
112393884 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
112393884
NCBI-ProteinID:
XP_024592065
UniProt:
A0A341AN80
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRGFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaactaccctttctggggtccaggaagagtctgctctttgc
tatcttctccaagtcgatgagtttagatttttattggactgtggctgggatgagcacttt
tctatggatattatagattccctgaggaagcatgttcaccagattgatgcagtactgttg
tctcaccccgatcctctccatcttggcgccctaccgtatgctgtcggaaagttgggtctg
aactgtgctatctatgcaaccattcctgtttataaaatggggcagatgttcatgtatgat
ctttatcagtcccgacacaatacagaagattttacactctttacactagatgatgtggat
gcagcctttgataaaatacagcagttaaaattctctcagattgtgaatttgaaaggtaaa
ggacatggcttgtctatcacacctctaccagctggtcatatgataggtggaacaatatgg
aagatagtcaaagatggagaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccacttaaatggatgttccctggaaatgctaagcagaccctctctacttatcaca
gattcatttaatgctacgtatgtgcagccgaggagaaaacaaagagacgagcaacttctg
acaaatgtcctggaaacacttcgaggtgatggaaatgtgttaatagcggtggacactgct
ggcagggttttggaacttgctcaactccttgatcaaatttggagaactaaagatgcagga
ttgggtgtttactcattggcactcctaaataatgtcagttataatgtggtggagttttct
aagtcccaggtagaatggatgagtgataaattgatgagatgttttgaagacaaaagaaat
aatccatttcagtttcgtcatctctctctatgtcatggtctttctgacttggctcgagta
cctagccctaaagtggtacttgccagccagcccgacctggaatgtggattttcaagggat
ctctttattcagtggtgccaggaccctaaaaactcgatcattctaacttacagaactact
cctgggactttagcacgtttcctaattgataatccttctgaaaaaattacagaaatagag
ttgaggaaacgtgtgaaacttgaagggaaagaacttgaagaatacttggaaaaagagaaa
ctaaagaaagaagctgctaaaaaacttgaacagtcaaaagaggcagacatagattccagt
gatgagagtgacgttgaggaagatattgaccagccatcagctcataagactaagcacgac
ctgatgatgaaaggtgaaggtagtcgtaaaggaagtttcttcaaacaggctaaaaagtct
tatcctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagaaattatc
aaaccagaggatttcttagtgccagaacttcaagctactgaagaagaaaaaagcaaatta
gagtctggcctgacaaatggagatgaacccatggatcaggatttatctgatgttcctact
aagtgtatttctacaacagaatctatagaaataaaagccagggttacttacatagactat
gaaggacgctctgatggggattccattaaaaaaatcatcaatcaaatgaaaccacgacag
ttgatcattgtccatggaccaccagaggccagtcaggatcttgcagagtgctgccgtggg
tttggtgggaaagatattaaagtgtacatgccaaagctacatgaaacagtcgatgccact
agtgaaactcatatctaccaggtgagattaaaagattcacttgtcagctcccttcagttt
tgtaaggcaaaagatgctgaattagcttggatagatggtgtcttagacatgagagtttcc
aaagtggacacaggagttattttagaagaaggagaacttaaggatgacggagaagactca
gaaatgcaagtggacgctccttcagattctagcgttatagcacagcagaaggccatgaaa
agtctgtttggagacgatgagaaagaaacaggtgaagaaagtgagatcattcctactttg
gaacccttaccacctcatgaggttcctggacatcagtcagtttttatgaatgaaccaaga
ctgtcggacttcaaacaagttcttttaagggaggggatccaagctgagttcgtaggaggt
gtactcgtttgcaacaatcaagtagcagtccgtagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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