Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112394501
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Entry
112394501 CDS
T08872
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04082
Neuroactive ligand signaling
nasi04721
Synaptic vesicle cycle
nasi04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112394501 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
112394501 (SLC6A4)
04721 Synaptic vesicle cycle
112394501 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nasi02000
]
112394501 (SLC6A4)
Transporters [BR:
nasi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112394501 (SLC6A4)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
112394501
NCBI-ProteinID:
XP_024593074
UniProt:
A0A341ASZ8
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All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
METTPLNSQKELTAYRDGEDCQGNSVLQKGVPVPGDKAESSQISNGYSAVPSPSAGEDTQ
HSIPAATTTLVAEVHPGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAVFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFAAQLPWTSCKNSWNTGNCTNYFSEDNVTWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITGVLDEFPHIWSKRREWFVLSVVITCFFGSLIT
LTFGGAYVVKLLEEFATGPAVLTVALIEAIAVSWFYGSPPHLLSTSEDQVQGINQFCSDV
KEMLGFSPGWFWRICWVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSS
FICIPMYITYRLIITPGTLKERLIKGITPETPTEIPCGDIHLNAV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttaaattcccagaaggagctaacagcatatagagatggagaagat
tgtcaaggaaacagtgttctacagaagggtgtccctgtccctggggataaggcggagtcc
agccaaatctcgaatgggtactcagcagttccaagccccagtgcaggagaagacactcag
cattccatcccggctgccaccaccaccctagtcgctgaggttcatccaggggaacgggag
acctggggcaagaaggtggatttcctcctctccgtcattggctatgctgtggacctgggc
aacgtctggcgcttcccctacatctgttaccagaacggagggggggcattcctcctcccc
tacactatcatggccgttttcggggggatcccgctcttctacatggagctcgcgctgggc
cagtaccaccgaaatggatgcatttcgatatggaggaaaatctgcccgattttcaaaggg
attggttacgccatctgcatcattgccttttacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctcttttgcggcccagctgccctggaccagctgt
aagaactcctggaacactggcaactgcaccaactacttctccgaggacaacgtcacctgg
acactccactcaacatcccctgcagaagaattttatacacgccacgtcctgcagatccac
cggtcaaaggggctccaggacctggggggcatcagctggcagcttgccctctgcatcatg
ctgatcttcactattatctactttagcatctggaaaggtgtcaaaacatctggcaaggtg
gtttgggtaacagccaccttcccttacatcatcctttcgatcctgctggtgagaggggcc
accctccccggagcctggaggggagttctcttttatttgaaacccaactggcagaaactc
ctggagacaggggtgtgggtggatgcggccgcccagatcttcttctctctcggtcctggc
tttggggtcctgctggcttttgcaagctacaacaaattcaacaacaactgttaccaagac
gccttggtgaccagtgtggtgaattgcatgacgagcttcgtttcaggatttgtcatcttc
acagtgctggggtatatggctgagatgaggaacgaagatgtgtctgaggtggccaaagat
gcaggccccagcctgctcttcatcacatatgcggaagccatagccaacatgccggcatcc
acgttctttgccatcatcttcttcctgatgttaatcacactgggcttggacagcacattt
gcaggcttggagggggtgatcacaggcgtgctggatgagtttccacacatctggtccaag
cgccgggagtggtttgtgctcagtgtggtcattacctgcttctttggatccctgatcacc
ctgacttttggaggggcctacgtggtgaagctgctggaggagtttgccacgggacccgca
gtgctcactgttgccctgatagaagcaattgctgtgtcttggttctatggaagtcctccc
cacctcctcagcacttcggaggaccaagtgcaaggcatcaatcagttctgcagtgatgtg
aaggaaatgcttggcttcagccctggatggttttggaggatctgctgggtagccatcagc
cctctgtttctcttgttcatcatttgcagttttttgatgagcccaccacagctacgactt
tttcagtacaattatcctcagtggagcatcatcctgggttactgcataggaacctcatct
ttcatctgcatcccgatgtatataacttaccgtctgatcatcactccagggacacttaag
gagcgtcttattaaaggtatcactccagaaacaccgacagaaattccctgtggggatatc
cacttgaacgctgtgtaa
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