Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112394669
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Entry
112394669 CDS
T08872
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04110
Cell cycle
nasi04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112394669 (SMC1B)
04114 Oocyte meiosis
112394669 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nasi03036
]
112394669 (SMC1B)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
112394669 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
112394669 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
AAA_33
Motif
Other DBs
NCBI-GeneID:
112394669
NCBI-ProteinID:
XP_024593300
UniProt:
A0A341ARW5
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MGHLELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKT
IQELIHGAHIGKPVSSSASVKIVYVEESGEEKTFARTIRGGCSEYCFNDSPVSRSAYITE
LEKIGIIVKARNCLVFQGTVESISLKKPKERTQFFEEISTSGELIGEYEEKKRKLQKAEE
DVQFHFNKKKNVAAERKYAKLEKEEAERYQSLLEELKINKIQLQLFQLYHNEKKISFLNS
ELERVNKDFSVAKESLSSHENIVKAKKKEHGMLSRQLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQIEEEILR
KGRDIELEASQLDQYKELKEQVRKKVAIMTQQLEKLQWEQKADEERLAFEKRRHGEAQEN
LKQIKEQIEDHKKRIEKLEEYIKTCMNFLKEKKQQEETLVEEIEKTKSRMSEVNEELNLI
RSELQNAGIDTHEGKRQQKRAEVLEHLKRLHPDAVFGRLLDLCHPIHKKYQLAVTKLLGR
YMVAIVVASEKVAKDCIRYLKEERAEPETFLALDYLDIKPINERLREIKGCKMVIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFNGPERRKTVALDGTLFLKSGVISGGSSDLK
YKARCWDEKELKNLRDRRTQLIQELKDLMKTLRKEADLKQIQTLVQGTHTRLKYSQSELE
IIKKKHLAAFYQEQSQLQSELLNIESQCTMLSEGIKERQRRIEEFEGKIHKVEDDIFQHF
CEEIGVENIREFENRHVKRQQEIDQKRLEFEKQNTRLNVQLEYSRNQLKKKLNKINTLKE
TVQKGSEDIDNLKKAEENCLKIVDELMEKRQQLKDMVVTQNTNTEKVQAQIEEERKKFLA
VDREVGKWRKKVVILQTSLEQKRLEKHNMLLDCKVQDIEILLLLGSLDDIIEVELGPEAE
STQATMDIYEKEEAIEIDYSSLREDLKALESEKEIEAHLKLLRQQVASREDVLLRTAAPN
LRAPENLKTVRDKFQEYTDAFEASRKEARICRQEFEQVKKRRYNLFSQCFEHISVAIDQI
YKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQEQFQMIIISLKEELYCKADALIGIY
PEHDDCMFSRVLTLDLSQYPDTEDRESSRRPVRTQNAPVP
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgggccatttggagctgctgctcgtggagaactttaagtcgtggcggggccgccaggtc
ataggccccttcaggaggttcacctgcatcattggccccaacggctccggaaaatctaat
gtaatggatgcacttagttttgtaatgggagaaaaaatagctaatttaagagtgaaaact
attcaagaacttattcatggagcacatattggaaagcctgtttcttcttctgcaagtgta
aaaattgtatacgtggaagaaagtggagaagagaaaacatttgcaaggactatccgaggg
ggatgctcagaatattgttttaatgatagtcctgtgagtcgttctgcttatatcacagag
ttagaaaagataggcataatagtcaaagcacggaactgtctagtttttcagggaactgtg
gagtcaatttcactgaaaaaacccaaagaaagaacgcagttttttgaggaaatcagcact
tcaggagagcttataggagaatatgaggaaaagaaaagaaagttacagaaagccgaagaa
gatgtacagtttcattttaataagaaaaaaaatgtagctgcagagcgtaaatatgcaaaa
ttagagaaggaagaggcagaacgttaccagagtctccttgaagaactgaaaataaacaag
atacaactgcagcttttccaactgtatcacaatgagaaaaaaatttcttttctaaacagt
gagttagagcgtgtgaataaggattttagtgtcgcaaaagagtctctttctagtcatgaa
aacatcgttaaagccaagaagaaggaacatggaatgttaagcagacaactgcaacaaaca
gaaaaagaattaaaatctcttgaagcacttttaaatcagaagaggcctcaatacattaaa
gctaaagaaaacacttctcaccacctcaagaagttagatgtggctaagaaatcaataaag
gacagtgaaaaacaatgttctaaacaggaagatgacataaaggccttagagacagagctg
gttgatttagatggtgcatggagaagttttgaaaagcagattgaggaagaaattttacgt
aaagggcgagacattgaactagaagccagtcagctggatcaatacaaagaacttaaggaa
caagtaagaaagaaagtggctataatgacccaacaattggaaaagctgcagtgggaacaa
aaggctgatgaagaaagactggcatttgaaaagaggaggcatggggaagctcaggaaaat
ctaaaacaaataaaagaacaaatagaagatcataaaaagcgaatagagaagttggaggag
tatataaaaacatgcatgaatttcttgaaagagaaaaaacagcaagaggaaaccctagtg
gaagaaattgaaaagacaaaatcaagaatgtctgaagttaatgaagagctgaatcttatt
agaagtgaactgcagaatgctggaattgatacccatgagggaaaacgtcagcaaaagaga
gcagaggttctggaacaccttaaaagacttcacccagatgctgtgtttggaagactgctt
gacctgtgtcatcctatacataagaaataccagctggctgtcactaaacttcttggtcgg
tacatggttgccattgttgtagcctctgaaaaggtagcaaaagactgtattcgatatctg
aaggaggaaagagctgaacctgagacattccttgctttagattaccttgatatcaaacca
atcaatgaaagattacgggagattaaaggctgtaaaatggtgattgatgtcataaagact
cagtttcctcagctgaagaaagtaattcagtttgtctgtggaaatggccttgtctgtgag
actgtggaagaagcaaggcatattgccttcaatggacctgaaagacggaaaacagtagct
cttgatggaacgttatttttaaaatctggagtcatctctggagggtcaagtgacttaaaa
tacaaggctagatgctgggatgagaaagaattaaagaatttaagagacaggagaactcaa
ctaatccaagaattaaaggatttaatgaagacacttcgcaaggaagcagatttgaaacaa
atacagactctagtacaaggaactcatacacgactcaaatattcgcaaagtgaactagaa
ataatcaaaaagaagcaccttgctgctttttaccaggaacaatctcagctacaaagtgaa
ttgctaaatattgagtctcaatgtactatgttgagtgaaggaatcaaagaacggcaacga
agaattgaggaatttgaaggaaagatacataaggttgaagatgatatttttcaacacttc
tgtgaagaaattggtgtagaaaatattcgtgaatttgagaacagacatgttaaacggcaa
caagaaattgatcaaaaaagattagaatttgagaaacaaaatactcggcttaatgttcaa
cttgaatatagtcgcaatcagctgaagaaaaaactgaataagattaacacattaaaagaa
actgtccagaaaggtagtgaagacatcgataacctaaagaaggctgaagaaaattgtctg
aaaattgtggatgaactcatggagaaacggcagcaacttaaggacatggttgtcactcag
aataccaacactgagaaagtccaagctcaaattgaagaggaacggaagaagtttttggca
gttgatagggaagtgggaaaatggcgaaaaaaagttgtaatccttcaaacttctctggaa
cagaagcggttagagaaacataacatgttgcttgattgcaaagttcaagacattgaaata
cttcttttgttggggtcactggatgacatcattgaagtggagttgggacctgaagcagaa
agtacccaggcaacaatggatatatatgaaaaagaagaagccattgagatagactacagc
tctctaagagaggatttgaaggctctagaatctgaaaaagaaattgaggcccaccttaaa
ctcctacggcaacaagtagcatcccgggaagatgtcctgctgaggacagcggccccaaac
ctcagagccccggagaacctaaagactgtcagagacaagtttcaggagtacacagacgct
tttgaggccagcagaaaggaagccagaatatgtaggcaagagtttgaacaggtgaaaaaa
aggagatacaatcttttcagccaatgttttgagcacatctcagtcgcaattgatcagatc
tacaagaagctctgcagaaacaacagtgcccaagcatttcttagcccagaaaacccagaa
gagccttacttggagggaattagctataactgtgtggccccaggcaaacggttcatgcca
atggataatttgtcggggggagaaaagtgtgtggcagctttggctctcctgtttgctgtg
cacagttttcggcctgctccattctttgttttagatgaagtagatgcagccctggacaac
actaacattggcaaagtatcgagttatatcaaagagcagactcaggaacagtttcagatg
ataatcatttccctaaaagaggagctgtattgcaaagctgatgcactgataggcatctat
ccagagcatgatgactgcatgttcagccgagttttgaccctagatctgtctcagtatcca
gatactgaagacagagaaagcagcaggaggcccgttaggacgcagaatgcccctgtgccg
taa
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