Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112394782
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Entry
112394782 CDS
T08872
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nasi03021
]
112394782 (TAF1B)
Transcription machinery [BR:
nasi03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
112394782 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF7339
DUF4661
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
112394782
NCBI-ProteinID:
XP_024593478
UniProt:
A0A341AV43
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MDLEEAKEFKDRCSQCAAVSWGLTDEGKYYCTSCHNVTERSREVINTGAIPNTKIQAINR
GLKRKRKLEKGWDWYVCEGFQHILYQQAKALQTLGVGPELKNEVLHNFWKRYLQKSKQAY
CKNPVYTSRRKTTVLEDNPSHSDWDSEPELLSDLSCPSFVESGAESQPDVHTQKPFPIIK
ASQSETASVCSGSLDGVEYSLRKEKGIVKMTVPRTLAFCYLSLLWQRETLTLADLLRFVE
EEHIPYINAFQHFPEEMKLYGRDKGIFAIESWPNYEDIYKKIIEVATFLDLPRFPDITED
CYLHPNILCMKYLMEVNLPDEMHDLTCHVVKVTGMGEVDFLTFDPIAKKGKTVKYDVQAV
AVIVVVLKLLFLLDDNLEWSLSNIAEKYNEKNEEDKPWFDFRKWYQVMKTAVDEKKQKWE
EARAKYLWKSEKPLYHSAIDRSVVYKRREMVVSLQKQFSTLVGSTPTVEKQSPSSFQFSW
TEEGSDRTCFHGHSLQGVLKQKGQSLMTKNSLYWLSTQKFCKSYCKHVTTYEESNFSLSY
QFILNLFSFLLRIKTSLLHEEVSLIEKRLFKAKYSTTKKKSSRSRKARKC
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaggaggcgaaagagttcaaagaccgttgttctcagtgtgctgctgtctct
tggggtctcactgatgaaggcaaatattattgcacttcttgccacaatgttacagaaaga
tctagggaagttataaacactggggctattcctaatactaaaatacaagccatcaaccgg
ggacttaaaagaaaacgaaaacttgagaaaggctgggattggtatgtgtgcgaaggtttt
cagcacatactttatcaacaagcaaaagccttacagacccttggagtaggcccagagtta
aagaatgaagttttacataatttttggaagcgctaccttcagaagagcaagcaggcatat
tgtaaaaacccagtttataccagtagaaggaaaactacggtattagaagataatccaagt
cattcagactgggacagtgagcctgagctgctgagtgacctgagctgtccttcttttgtt
gaaagtggagcggaatctcagcctgatgtccacactcaaaagcctttccccatcatcaaa
gcatcacaatcagaaacagcatctgtctgttctggatctcttgacggagttgagtattca
ctgcgaaaggagaagggaattgtgaagatgactgtgccacggacgctagctttctgctac
ctgtcattgctttggcagagggagacactcactcttgcggatctcctgagattcgttgaa
gaggaacatattccttatataaatgcttttcagcattttccagaagagatgaaattatat
gggcgtgacaaaggaatctttgctatagagtcttggcctaactatgaagatatctataaa
aaaataattgaagttgccacatttttagatttgccacgttttccagacataactgaagac
tgctatcttcatccaaacatcttgtgtatgaaatacttgatggaagtcaatctccctgat
gaaatgcatgatttaacctgccacgtggtaaaagtgactggaatgggagaagtggatttt
ctaacatttgatcctatagctaaaaagggaaaaactgttaaatatgatgtacaagctgta
gctgtcattgtagtggtattgaaactgctctttttattggatgacaatttagaatggtct
ttgtctaatattgctgagaaatacaatgaaaagaatgaagaagataagccatggtttgat
ttcagaaaatggtaccaagttatgaagacagctgttgatgaaaaaaaacaaaaatgggag
gaagccagggcaaagtatctatggaaaagtgaaaagccactctaccactcagcgattgac
agatcagtggtatataaaagaagggaaatggtcgtgagtctacaaaaacaatttagcaca
ctggttggttcaacaccaactgttgaaaaacaaagcccttcaagttttcagttcagctgg
accgaagagggcagtgatagaacttgtttccatgggcatagcctccagggagtcctgaag
cagaaaggccagtcactgatgaccaagaattccctctattggctgagtactcagaaattc
tgtaaaagctattgtaagcatgtgacaacctacgaagaatcgaatttttctctgagttat
cagtttatactaaatctcttctccttcttgctaagaataaagacctcccttctccatgaa
gaagtgagcttaatagaaaagagactttttaaagcaaaatacagtacaacaaaaaagaaa
tcttcaagatccaggaaagcaagaaaatgttga
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