Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112395007
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Entry
112395007 CDS
T08872
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112395007 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112395007 (WDR33)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112395007 (WDR33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
Collagen
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
112395007
NCBI-ProteinID:
XP_024593809
UniProt:
A0A341AV10
LinkDB
All DBs
Position
Unknown
AA seq
1371 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGTSGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPGTQGMQGPPGPRGMQGPPHPHGMQGGPGSQGIQGPVSQGPLMGLNP
RGMQGPPGPRENQGPAPQGMMLGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGMQGPPP
QGSMMGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPIP
FQQQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGTKGR
RESRESGPAGPHWINQRHRPSPGATSLLICSGDSRGPPNHHMGPMSERRHEQSSGPEHGP
ERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFHPDKRFGHRLREFEGRGGPLPQEEKW
RRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGRRPGDERFPRDPEDPRFRGRREESFR
RGAPPRHEGRAPPRGRDGFPGPEDFGPEENFDASDETARGRDLRGRGRGAPRGGRKGLLP
TPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPRPDHPPHDGHSPASRERSSSLQGMDM
ASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGGKGRGGPGPSQRVPKSGRSSSLDGDHH
DGYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSNMNSGPPRRGASRGGGRGR
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccaacaccag
gcacctcgacagctattttataagcgacctgattttgcacagcagcaagcaatgcaacag
cttacctttgatggaaaacgaatgagaaaagcagtaaaccgaaaaaccatagactataat
ccatctgtaattaagtatttggagaatagaatatggcaaagagaccagagagatatgcgg
gcaattcagcctgatgcaggttattataatgatctggttccacctattgggatgttgaat
aatcctatgaatgcagtaacaacaaagtttgttcgaacatcaacaaataaagtaaagtgt
ccagtatttgttgttaggtggactccagaaggaagacggttagtcactggagcctctagt
ggagagttcaccttgtggaatggactcactttcaattttgaaacaatattacaggctcac
gatagcccagtgagagccatgacttggtcacataatgacatgtggatgttgacagcggac
cacggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcacggtgctgatgtgaagtgtgtagactggcatccaacaaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacacagtaatggaagtgaaattaaatctcaatggt
aactggctactcacagcatcacgcgaccacctctgtaaacttttcgacatccgaaacctg
aaagaagagcttcaagtcttccgaggtcataagaaagaagctacagctgtggcctggcat
cctgttcatgaaggactttttgccagtggagggtctgatggctctttgttattctggcat
gttggggtagagaaagaagtgggtgggatggagatggcccatgaaggaatgatttggagt
ctggcttggcatcctcttggacatattctctgctcaggctcaaatgaccatactagcaaa
ttttggacccgaaaccgaccaggtgataaaatgcgagatcgatacaatctaaacctgttg
cctggaatgtctgaagatggagtggaatacgatgaccttgaacctaatagcctggcagta
attccagggatgggaataccagaacaactaaaattagctatggaacaagaacagatgggg
aaagatgaatcaaacgaaattgaaatgacaattccaggtttagattggggaatggaggag
gtgatgcaaaaggatcagaaaaaagtacctcagaagaaagttccttatgcaaaacctatt
cctgctcagtttcagcaggcttggatgcaaaataaagtcccaattcctgccccaaacgag
gtattgaatgacagaaaagaagacattaaattggaagagaagaaaaaaacacaagcagaa
atcgaacaagagatggccacattacagtatactaacccacagcttctggagcaacttaaa
attgaaagacttgcacagaaacaggctgagcaaattcagcctcctccttcatctggcacc
cctctcctgggaccccagccctttccaggacaaggtccaatgtctcagattcctcaaggt
tttcaacagcctcatccatctcagcagatgccaatgaacatggctcaaatggggcctcca
ggtccacagggacagtttaggccccctggaccccagggacaaatgggaccacagggtcct
ccactgcatcagggaggtggggggccacaaggattcatgggaccacaagggccccagggc
ccaccccaggggttgccgaggcctcaggacatgcatgggccccaaggaatgcaaaggcat
cctggacctcatggccctttgggacctcaaggaccacctggaccacagggcacttctggt
cctcaaggtcatatgggtcctcagggcccacctggcccacaaggtcacataggcccccaa
ggcccacctggtccccagggtcacttgggccctcagggacctggtactcaaggtatgcag
ggaccacctggtcccagaggaatgcaaggacctccccatcctcatgggatgcaaggtggg
ccagggtctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaatcca
agaggaatgcagggtcctccaggcccccgagagaaccagggtcctgctccccaagggatg
atgctgggccacccgcctcaagagatgagaggacctcatcctccaagtggactgctggga
catggccctcaggagatgcgaggtcctcaggagatgcgaggcatgcaggggcctccaccc
caaggatcaatgatgggccctccccaggaattgcgagggcctccaggctcacaaggtcag
caggggccgccccagggctctttgggacctccaccccagggtggcatgcaagggccccct
ggacctcagggacagcagaacccggcaagagggccacatccatctcaagggccaatacca
ttccagcagcagaaaacagctctgctaggtgatgggccccgggcccccttcaaccaggaa
ggacagaacgcaggccccccacccttgataccaggcctagggcagcagggagcacaaggt
cgcatcccccctcttaatcctggacaaggacctggccctaacaaagggaccaaagggaga
agggagagccgagaaagtggccctgccggcccccactggattaaccagcgccaccgcccg
tcaccaggggccacatcccttctgatttgtagtggtgactcacgtggccctccgaaccat
cacatgggcccaatgtcagagagacggcacgagcagagcagcggtcccgagcacggtccc
gagaggggtcctttccggggcggccaggactgcaggggtccccctgataggcgcggccct
caccccgacttccccgatgacttcagcagaccagatgacttccaccccgacaagcgcttt
ggccaccggttacgtgaatttgaggggcgaggaggacctttaccgcaagaagagaagtgg
aggcgtgggggccctgggcctccgtttcctcctgatcacagggagttcagtgagggggat
ggccggggcgcggcccggggccctccaggggcgtgggaaggccgcagacctggagacgag
cgcttcccccgggatcctgaggacccacggtttcgagggcgcagagaagaaagcttcaga
cgaggagcccccccaagacatgagggccgtgctccccccagaggaagggatggttttcct
ggtcccgaagactttggaccagaggagaattttgatgcttctgatgaaacagcccgagga
agagatctcagaggtcgaggtcggggtgccccacgaggaggaaggaagggtttacttccc
actcctgatgagttccctcgctttgaaggaggtcggaaaccagactcctgggatggaaat
agagagccagggccaggtcatgaacatttccgtgatgctccccgccctgaccatccccct
cacgacggtcattccccagctagcagagaacggtcctcttctctccaaggcatggacatg
gcatccctaccaccccgaaagcgcccctggcatgatgggccaggaacctctgagcataga
gaaatggaagccccagggggtccttctgaggatcgaggaggcaaaggccgagggggcccc
ggaccttctcagagagtgccaaagtccggacgttccagctccttggatggagatcaccac
gatggataccacagagatgaaccttttgggggccctccaggcagtggtaccccttctaga
gggggccggagtggcagtaactggggtagagggagtaacatgaactctggcccgccaagg
cgaggagcttcaagggggggtggaaggggtcggtag
DBGET
integrated database retrieval system
